Gene MADE_00644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00644 
Symbol 
ID6778903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp666906 
End bp668405 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content50% 
IMG OID642754079 
Productcarbohydrate kinase, YjeF related protein 
Protein accessionYP_002124956 
Protein GI196155467 
COG category[G] Carbohydrate transport and metabolism
[S] Function unknown 
COG ID[COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGATA CTCAATTAAC GTCAAGTTTA TCATACAATC TATTTCGGGC CGATCAGGTT 
AGAGAAAATG AAGCGCAAGC TGCTGCAGAC TCTGGCTGCG ATATGTTTAC TTTGATGCAA
CGGGCAGGGG ACGTAGTATT TAAGCAATGC TTAGAGCTGA TGCCAAATTC GGATACCTAT
TTAGTATTGG TAGGCCAAGG AAACAACGCC GGAGACGGCT ATATTGCAGC AATTAACGCC
AAACTTGCGG GTAAGCAAGT TCATCTTTGT GCGGTAGAGC CACAGCGTAC GCTTGAAGGG
GATGCCGGTA CGGCGCAGCA GCGCTGGCTT GACTCGGGAG GCAGTATTGA TGGTTTCGAA
CCTGCTTTAT TAGAAAAAGC GGATGTAGTG ATAGACGCTC TTCTTGGCAC GGGTATCAAT
AGTTATATCC GCAACGAATT TGCCGATGTT ATTGATGCGG TGAACGCATC AGCAACCCCC
GTTGTGAGTG TGGATGTGCC TTCTGGCTTA GATGCTAATA CCGGGCAGAG TTTGGGCCGG
TGTGTACAGG CTGATGTTAC GGTGACCTTT GTAGGTATCA AGCCAGGGCT TGTCACAGGT
GCAGGTAAAC AGTCTTGCGG CAAGCTGGTT TATGCCGACT TGGGTATTGG CAAAGCGTTT
CAGGCGCTTG CGAAGGCGAG TGCAACCATG CTCAACATTG AGCACTTCAA AGGCATGGGG
CCGCGCGATA TAAATAGCCA CAAGGGAACC TACGGAAGAC TATTGTGCAT TGGTGGTAAC
CGCGGTACAG CAGGCGCTAT CCGCCTAGCC AGTGAAGCGG CGTTGCGAAG TGGTGCGGGT
ATGGTTCGCG TGTATACCCA TGAATCGTCG GTCGTTCAGG TTAGTGCAGG GCGCCCCGAG
TTGATGGTGA CTGACTATAA TTTGGAAGAT GCGCTCGCGT GGGCAACCTG TGTGGTTATC
GGGCCAGGTT TAGGTCAAGA TGAATGGGCT GAAACCGTCT TTGAAACCAC AATGAAGCAC
TGTCAAAGCA AAAATAAGCC GGTTGTTATC GATGCCGACG CGTTAAATTT ACTGTGTAAG
CAGTCGACGG CTTATACATT GTCAGACAGT ATCCTTACCC CTCATTCAGG TGAAGCCGCG
CGCTTACTGG GTGTTTCTAT CGATGACGTA GAAAGCGACC GGTTTAACTA TGCAAGGCAG
TGTTCACAGC GTTACCACGC CGTCTGCGTG CTAAAAGGGG CGGGTACGCT TATTGATAAC
GAAAAGAAAA CCTGGGTTTG CCGTCATGGT AATCCGGGGA TGGCTACCGC GGGAAGTGGA
GATGTGTTAA GTGGCATTTT AGGGGCATTG CTCGCTCAAG GTGTAGAAAC AGATATTGCT
GCAAAATACG GCGTAGTGCT GCACGCGAAA GCGGGAGATG ATATTGCCCA ACTCTATGGT
CAACGTGGTA TGATAGCGAG CGATTTGTTT GACGCAGTAC GTGCATTAAT AAACCACTAG
 
Protein sequence
MLDTQLTSSL SYNLFRADQV RENEAQAAAD SGCDMFTLMQ RAGDVVFKQC LELMPNSDTY 
LVLVGQGNNA GDGYIAAINA KLAGKQVHLC AVEPQRTLEG DAGTAQQRWL DSGGSIDGFE
PALLEKADVV IDALLGTGIN SYIRNEFADV IDAVNASATP VVSVDVPSGL DANTGQSLGR
CVQADVTVTF VGIKPGLVTG AGKQSCGKLV YADLGIGKAF QALAKASATM LNIEHFKGMG
PRDINSHKGT YGRLLCIGGN RGTAGAIRLA SEAALRSGAG MVRVYTHESS VVQVSAGRPE
LMVTDYNLED ALAWATCVVI GPGLGQDEWA ETVFETTMKH CQSKNKPVVI DADALNLLCK
QSTAYTLSDS ILTPHSGEAA RLLGVSIDDV ESDRFNYARQ CSQRYHAVCV LKGAGTLIDN
EKKTWVCRHG NPGMATAGSG DVLSGILGAL LAQGVETDIA AKYGVVLHAK AGDDIAQLYG
QRGMIASDLF DAVRALINH