Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00641 |
Symbol | |
ID | 6778161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 663902 |
End bp | 665044 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642754076 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_002124953 |
Protein GI | 196155464 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGTAT ACTTCGGCGC TCTATTATCT TCAGTTATTC AGGTGAGTTA TATGTCGCAA AATGTCCCCA GTGTTGATAA ACCCGCGTTA AAGAACGATC GCTATTTACG TGCGTTACTT AAACAGCCGG TAGATGTCAC ACCTGTATGG ATGATGCGAC AAGCTGGGCG TTATCTTCCT GAATACAAAG CAACTCGCGC GGTGGCGGGT GATTTCATGT CGCTTTGTAA AAATGCTGAA CTTGCGTGTG AAGTTACGCT TCAACCTTTG CGTCGTTTTC CCCTTGATGC AGCCATTCTT TTTTCTGATA TTTTGACTAT TCCCGATGCC ATGGGACTAG GTCTTTACTT CGAAACGGGT GAAGGCCCGC GCTTTAAGAA TCCTATCACC TGCAAAGCTG ATGTAGACAA AATTGGTCTT CCAGATCCAG AAGGCGAATT ACAGTATGTA ATGAACGCGG TTAGAACTAT TCGTCGCGAA CTGAAAGGTG AGGTGCCACT AATCGGGTTC TCGGGAAGTC CATGGACGCT CGCAACCTAC ATGATTGAAG GTGGCTCTAG TAAAGCATTC ACTAAAATTA AAAAGATGGC CTTTGCTGAG CCTGCCACGC TTCATGCGCT ATTAGCAAAG CTCGCCGATT CGGTTACCGA GTACCTTAAC GCACAAATTG CGGCAGGTGC GCAATCGGTC ATGGTCTTTG ATACATGGGG TGGCGTTTTA TCACCTCGCG ATTACAAAGA ATTCTCGCTT CAATATATGG AGCGTATTGT AAGTGGTCTA ACTCGTGAAA ATGAAGGCCG CAAAGTGCCA GTAACACTGT TTACTAAAAA CGGTGGCATG TGGCTAGAGT CTATCGCAGC AACAGGCTGT GATGCAGTTG GCTTAGATTG GACTATCGAT ATCAAAGAAG CCCGTGCACG TATTGGTGAT AAGGTGGCGC TACAAGGCAA TATGGACCCG TCTATGTTAT ATGCACAGCC TCAAAGAATA GAGCAAGAAG TGGCTTCAAT TCTAGAGGGT TACGGCGAAG GCAGTGGTCA TGTATTTAAC TTAGGACACG GCATCCACTT AGATGTTCCG CCTGAGAATG CCGGCGTATT CGTAAATGCA GTTCACGAAT TAAGTAAGCA ATATCACAAA TAA
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Protein sequence | MLVYFGALLS SVIQVSYMSQ NVPSVDKPAL KNDRYLRALL KQPVDVTPVW MMRQAGRYLP EYKATRAVAG DFMSLCKNAE LACEVTLQPL RRFPLDAAIL FSDILTIPDA MGLGLYFETG EGPRFKNPIT CKADVDKIGL PDPEGELQYV MNAVRTIRRE LKGEVPLIGF SGSPWTLATY MIEGGSSKAF TKIKKMAFAE PATLHALLAK LADSVTEYLN AQIAAGAQSV MVFDTWGGVL SPRDYKEFSL QYMERIVSGL TRENEGRKVP VTLFTKNGGM WLESIAATGC DAVGLDWTID IKEARARIGD KVALQGNMDP SMLYAQPQRI EQEVASILEG YGEGSGHVFN LGHGIHLDVP PENAGVFVNA VHELSKQYHK
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