Gene MADE_00641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00641 
Symbol 
ID6778161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp663902 
End bp665044 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content46% 
IMG OID642754076 
Producturoporphyrinogen decarboxylase 
Protein accessionYP_002124953 
Protein GI196155464 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID[TIGR01464] uroporphyrinogen decarboxylase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTAT ACTTCGGCGC TCTATTATCT TCAGTTATTC AGGTGAGTTA TATGTCGCAA 
AATGTCCCCA GTGTTGATAA ACCCGCGTTA AAGAACGATC GCTATTTACG TGCGTTACTT
AAACAGCCGG TAGATGTCAC ACCTGTATGG ATGATGCGAC AAGCTGGGCG TTATCTTCCT
GAATACAAAG CAACTCGCGC GGTGGCGGGT GATTTCATGT CGCTTTGTAA AAATGCTGAA
CTTGCGTGTG AAGTTACGCT TCAACCTTTG CGTCGTTTTC CCCTTGATGC AGCCATTCTT
TTTTCTGATA TTTTGACTAT TCCCGATGCC ATGGGACTAG GTCTTTACTT CGAAACGGGT
GAAGGCCCGC GCTTTAAGAA TCCTATCACC TGCAAAGCTG ATGTAGACAA AATTGGTCTT
CCAGATCCAG AAGGCGAATT ACAGTATGTA ATGAACGCGG TTAGAACTAT TCGTCGCGAA
CTGAAAGGTG AGGTGCCACT AATCGGGTTC TCGGGAAGTC CATGGACGCT CGCAACCTAC
ATGATTGAAG GTGGCTCTAG TAAAGCATTC ACTAAAATTA AAAAGATGGC CTTTGCTGAG
CCTGCCACGC TTCATGCGCT ATTAGCAAAG CTCGCCGATT CGGTTACCGA GTACCTTAAC
GCACAAATTG CGGCAGGTGC GCAATCGGTC ATGGTCTTTG ATACATGGGG TGGCGTTTTA
TCACCTCGCG ATTACAAAGA ATTCTCGCTT CAATATATGG AGCGTATTGT AAGTGGTCTA
ACTCGTGAAA ATGAAGGCCG CAAAGTGCCA GTAACACTGT TTACTAAAAA CGGTGGCATG
TGGCTAGAGT CTATCGCAGC AACAGGCTGT GATGCAGTTG GCTTAGATTG GACTATCGAT
ATCAAAGAAG CCCGTGCACG TATTGGTGAT AAGGTGGCGC TACAAGGCAA TATGGACCCG
TCTATGTTAT ATGCACAGCC TCAAAGAATA GAGCAAGAAG TGGCTTCAAT TCTAGAGGGT
TACGGCGAAG GCAGTGGTCA TGTATTTAAC TTAGGACACG GCATCCACTT AGATGTTCCG
CCTGAGAATG CCGGCGTATT CGTAAATGCA GTTCACGAAT TAAGTAAGCA ATATCACAAA
TAA
 
Protein sequence
MLVYFGALLS SVIQVSYMSQ NVPSVDKPAL KNDRYLRALL KQPVDVTPVW MMRQAGRYLP 
EYKATRAVAG DFMSLCKNAE LACEVTLQPL RRFPLDAAIL FSDILTIPDA MGLGLYFETG
EGPRFKNPIT CKADVDKIGL PDPEGELQYV MNAVRTIRRE LKGEVPLIGF SGSPWTLATY
MIEGGSSKAF TKIKKMAFAE PATLHALLAK LADSVTEYLN AQIAAGAQSV MVFDTWGGVL
SPRDYKEFSL QYMERIVSGL TRENEGRKVP VTLFTKNGGM WLESIAATGC DAVGLDWTID
IKEARARIGD KVALQGNMDP SMLYAQPQRI EQEVASILEG YGEGSGHVFN LGHGIHLDVP
PENAGVFVNA VHELSKQYHK