Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00631 |
Symbol | |
ID | 6778860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 654192 |
End bp | 655082 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642754066 |
Product | regulatory protein, LysR:LysR, substrate-binding |
Protein accession | YP_002124943 |
Protein GI | 196155454 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0783692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCACC TAAACTACCA TCATTTATAC TATTTTTATC TGGTCGCCCG CGAGGGCAGT ATTGCTAAGG CAGCCAAGTT ACTTCACGTT ACTCCTCAAA CGGTTAGCGG GCAACTTAGT ACCTTCGAAA ACCAGCTTGG CTATGCCCTA TTCGACAGAA TAAACAAGCG GCTATACCTC AACGCGAGAG GTAAAGTTAC CTATCAGTAT GCCAGTGAAA TATTTCATAA AGGTAATCAA CTGGCTGAAA TACTTAACAA TAGCGATGAA GTGAATACGA AAGAATTCGT AATAGGTATT ACAAACGGTA TTCCAAAAGT GCTTTTTTAC GATTTTGTTC ACGACATCAT GCGTCGGTTT TCTCATGTGA AGTATGTAAT TAAAGAAGAC AGCTTCGATG GATTACTGAA AGAGCTGGCC ATTAACGCTA TCGACTTTAT TGTTGCAGAC CGCGGCATAG CGCCGGGTAC GCAAATTAGC GCCAATAGCT TTTTCTTAGG TGAAAGCTCG TTAAGTTTTT TTGCGAAATC ACCACTTAGT GAAGAACAAA CCTTTCCTGA CTGTTTAAAT CAGATGCCGT TACTTATCCA AGGCAACACG TCGGGGATAC GACAAGCATT AACTAGCTGG CTTGAAACCG AACAGCTTTA CCCAAAAATT GTGGCCGAGT TCGATGATAC CGCTTTATTG AAGCTATTTG GCAGCGAAGA CTTTGGCGTG TTCTGCGCAC CATCGGCTAT TTCGAAACAC GTTGAAGAGC AATATGGTGT GCATTGTATT GGCAACGCGA ATACGCTCAA CGAACGATAC TACGCTATTA CAGGTAAAAG CCGTGCTGAC TATACGATTA GTGAGGCGAT TGTTGAATCG GCCAGGGAGA TTCTAGCGTG A
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Protein sequence | MHHLNYHHLY YFYLVAREGS IAKAAKLLHV TPQTVSGQLS TFENQLGYAL FDRINKRLYL NARGKVTYQY ASEIFHKGNQ LAEILNNSDE VNTKEFVIGI TNGIPKVLFY DFVHDIMRRF SHVKYVIKED SFDGLLKELA INAIDFIVAD RGIAPGTQIS ANSFFLGESS LSFFAKSPLS EEQTFPDCLN QMPLLIQGNT SGIRQALTSW LETEQLYPKI VAEFDDTALL KLFGSEDFGV FCAPSAISKH VEEQYGVHCI GNANTLNERY YAITGKSRAD YTISEAIVES AREILA
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