Gene MADE_00631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00631 
Symbol 
ID6778860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp654192 
End bp655082 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content43% 
IMG OID642754066 
Productregulatory protein, LysR:LysR, substrate-binding 
Protein accessionYP_002124943 
Protein GI196155454 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0783692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCACC TAAACTACCA TCATTTATAC TATTTTTATC TGGTCGCCCG CGAGGGCAGT 
ATTGCTAAGG CAGCCAAGTT ACTTCACGTT ACTCCTCAAA CGGTTAGCGG GCAACTTAGT
ACCTTCGAAA ACCAGCTTGG CTATGCCCTA TTCGACAGAA TAAACAAGCG GCTATACCTC
AACGCGAGAG GTAAAGTTAC CTATCAGTAT GCCAGTGAAA TATTTCATAA AGGTAATCAA
CTGGCTGAAA TACTTAACAA TAGCGATGAA GTGAATACGA AAGAATTCGT AATAGGTATT
ACAAACGGTA TTCCAAAAGT GCTTTTTTAC GATTTTGTTC ACGACATCAT GCGTCGGTTT
TCTCATGTGA AGTATGTAAT TAAAGAAGAC AGCTTCGATG GATTACTGAA AGAGCTGGCC
ATTAACGCTA TCGACTTTAT TGTTGCAGAC CGCGGCATAG CGCCGGGTAC GCAAATTAGC
GCCAATAGCT TTTTCTTAGG TGAAAGCTCG TTAAGTTTTT TTGCGAAATC ACCACTTAGT
GAAGAACAAA CCTTTCCTGA CTGTTTAAAT CAGATGCCGT TACTTATCCA AGGCAACACG
TCGGGGATAC GACAAGCATT AACTAGCTGG CTTGAAACCG AACAGCTTTA CCCAAAAATT
GTGGCCGAGT TCGATGATAC CGCTTTATTG AAGCTATTTG GCAGCGAAGA CTTTGGCGTG
TTCTGCGCAC CATCGGCTAT TTCGAAACAC GTTGAAGAGC AATATGGTGT GCATTGTATT
GGCAACGCGA ATACGCTCAA CGAACGATAC TACGCTATTA CAGGTAAAAG CCGTGCTGAC
TATACGATTA GTGAGGCGAT TGTTGAATCG GCCAGGGAGA TTCTAGCGTG A
 
Protein sequence
MHHLNYHHLY YFYLVAREGS IAKAAKLLHV TPQTVSGQLS TFENQLGYAL FDRINKRLYL 
NARGKVTYQY ASEIFHKGNQ LAEILNNSDE VNTKEFVIGI TNGIPKVLFY DFVHDIMRRF
SHVKYVIKED SFDGLLKELA INAIDFIVAD RGIAPGTQIS ANSFFLGESS LSFFAKSPLS
EEQTFPDCLN QMPLLIQGNT SGIRQALTSW LETEQLYPKI VAEFDDTALL KLFGSEDFGV
FCAPSAISKH VEEQYGVHCI GNANTLNERY YAITGKSRAD YTISEAIVES AREILA