Gene MADE_00592 details

Gene Information

• Locus tag: MADE_00592
• ID: 6777041
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: +
• Start bp: 627158
• End bp: 629179
• Gene Length: 2022 bp
• Protein Length: 673 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 642754027
• Product: Beta-hexosaminidase A precursor
• Protein accession: YP_002124904
• Protein GI: 196155415
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1472] Beta-glucosidase-related glycosidases

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGGGAAA TACGTATAGC CCTAGGCTTT TTAGCGATTA CTTTTTTAGC GGGTATAACT 
TCTGCTCAGC CCTTAAGTGC TAACGCCCCG GTCAACTTAA CCACAGGTAA GAGTTCCTCT 
ATTCAAAAAG GGGGCGCACA AGGCGGTATA CAGCAAAACG CAGATAGTCT TAGCACCATC 
AAGGCCATGC TGGGCCAAAA GATCATTTTA GATTTTCGCT ATTTCTGCGA AGACGACACA 
CCATCATCGC AATGCCGCAC ACCAATGACG AAAATCCCTG CAAGTTTGCT GGCACTATTA 
AGTGGTCACA ACATTGGTGG CGTGATTCTG TTTTCAGAAA ACATTGAAAA TACCGAGCAG 
TTGATAACGC TAAATTACAC TATGCAGCAG CATATGTTGA AAGTGGGCAA GCAACCATTA 
TTTATCGCTA TCGATCAAGA GGGCGGTAGG GTAGCGCGCC TGCCCTCAGA CATGTTAGCG 
CCATTTGCCG GTAATATGGC AATTGGTGCG ACGTTTCATC AACATGGCAG TACTTTTGCG 
CAACGCGTGG CTCGCCACAT CGGTAAAACG CTCTTACCCC TTGGTATTAA CACCAACTTT 
GCCCCATCAG TTGATATAAA CAGCGAGCCG AAAAACCCGG TTATAAACGT GCGCAGTTTT 
TCAGAACATC CAGAGCAGGT TGCTGCGCTG GGCCAAACGT TTGTTGAAGC AATGCAGGGG 
ACGGGCGTGA TAAGTGCAAT TAAGCATTTT CCAGGTCATG GCGACACGCA TGTGGATAGT 
CACAGCGGTC TTCCACTGGT AAGTCATACC CGAGCACAAG CAATGACGGG TGATATTCTG 
CCGTTTTCTA ATATTATTAG AAGTGCCACA CCGCCGGCCA TGGTAATGAG TGCACACATT 
CAGTATCCAT CGTTAGACGA TACCAAAATT ACAGACAAGA ACGGAAAGCG ACAAATAGTT 
CCAGCGACTT TGTCGAAGAA GATATTAACC AACTTGCTTC GCAAGCAACT GGGGTATAAA 
GGTCTAATTG TTACTGACGC TCTAGATATG GCGGGTATTA CACAGTTCTT CTCGCACGAA 
GAGGCTTTAG TTCGCGCATT TAGTGCGGGC GCGGATATTG CGCTTATGCC TTTCACTATA 
AGAAATAAAA CGGATATAAA TGCGTTTGTA AAGCTTCTCG ACAATGTAGC AGTAAAACTC 
GCAGATAGCG CATTAGATAC ATCATCAGAA AGCGCTTTCT TGGTATCTTC ATATAATCGT 
ATTATCGAAG CAAAACAACG GTTTACGCTA GATGGTTTTA TTTCCAAGCC GAAGGTCTGG 
TGGCTTGATG AAGCAAACGA CAATGCATTG ACTAATAACC CTAACAGTTT AAAAAACAAA 
GGAATTAGAA TAGAGAAAGC GCTTTCTGAA GGTTCGGTGT CTGTGCTTTT CGGAAAAGAA 
AAACTACCGA TAACATCAAC GCGCTGGTTG GCGCTAATGC CGGATGCGGC GAGGTGTTTA 
GCATTTGAAG CCGCACTTGC ACATGCTAGT TCTAAAAGCA CCAATAAGCC TCTAGAGTTT 
GCTTGTTTAC CCCTAACCGC GCTACCTAAC ACCCAATTAG CTATGGACCT ATTACAGCAG 
GCTGAAGCTT TAATAGTAGG TAATATTAGC CCGCTTCACG CGACCTATGA GTTAGGTGGG 
TTTGATCTAC CTGAGCATGT GAAGCGACGC GCGCGTGAAA CTGAGGTGAT GGCATTTAGT 
AAAAAGATAA TGTCTGCTGC GAAAACACAA AATAAAACCG TAGTTTTTGC ACCGCTACGT 
ATGCCGTATA GTGCACAAGA TGTTAAAAGC ATGACAGATA TTGCTATTGC CACATTCAGT 
TATGCCATTA GTGTAAGCGC CCAAGGTAGC AAAGAAGAAA ACAAAGACGA TCAAAAGGTT 
ACCAGCTATA GTTTGAACGC ACTAGCTGAT GTTTTATTAG GAAACATGGC TGCTAAAGGC 
CGTTCACCCG TTTCGTTAGA CTCACTTTCA CTACAAAAGT AG 

 

Protein sequence

MGEIRIALGF LAITFLAGIT SAQPLSANAP VNLTTGKSSS IQKGGAQGGI QQNADSLSTI 
KAMLGQKIIL DFRYFCEDDT PSSQCRTPMT KIPASLLALL SGHNIGGVIL FSENIENTEQ 
LITLNYTMQQ HMLKVGKQPL FIAIDQEGGR VARLPSDMLA PFAGNMAIGA TFHQHGSTFA 
QRVARHIGKT LLPLGINTNF APSVDINSEP KNPVINVRSF SEHPEQVAAL GQTFVEAMQG 
TGVISAIKHF PGHGDTHVDS HSGLPLVSHT RAQAMTGDIL PFSNIIRSAT PPAMVMSAHI 
QYPSLDDTKI TDKNGKRQIV PATLSKKILT NLLRKQLGYK GLIVTDALDM AGITQFFSHE 
EALVRAFSAG ADIALMPFTI RNKTDINAFV KLLDNVAVKL ADSALDTSSE SAFLVSSYNR 
IIEAKQRFTL DGFISKPKVW WLDEANDNAL TNNPNSLKNK GIRIEKALSE GSVSVLFGKE 
KLPITSTRWL ALMPDAARCL AFEAALAHAS SKSTNKPLEF ACLPLTALPN TQLAMDLLQQ 
AEALIVGNIS PLHATYELGG FDLPEHVKRR ARETEVMAFS KKIMSAAKTQ NKTVVFAPLR 
MPYSAQDVKS MTDIAIATFS YAISVSAQGS KEENKDDQKV TSYSLNALAD VLLGNMAAKG 
RSPVSLDSLS LQK