Gene MADE_00588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00588 
Symbol 
ID6776913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp622856 
End bp623284 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content47% 
IMG OID642754023 
Productpredicted dioxygenase of extradiol dioxygenase family protein 
Protein accessionYP_002124900 
Protein GI196155411 
COG category[R] General function prediction only 
COG ID[COG3565] Predicted dioxygenase of extradiol dioxygenase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCCAGC CCTTTCATCT TGCCATACCG GTCACTAATT TAACCGATGC AGAAGCGTTC 
TACGGTGAGT TGCTAGGTTG TGAAAAGGGC CGCAGTGATA GCCAGTGGAT AGACTGGAAT
TTCTTCGGTC ATCAACTAGT GACGCACTGC GTAGAGGTCA TGCCGTCACC GCCTTCGTAT
AATGGGGTAG ATGACCATGC CGTGCCCGTG CCGCATTTTG GCGTTGTTTT AACCATGAGT
GATTGGCAAG CACTGGCAAA TAAATTAGAA ACAGCAAACA CTGAGTTTGT TATTGCGCCC
TATATTCGCT TTAAAGGAAA GCCGGGCGAA CAGGCCACTA TGTTTTTTAA AGACCCCTTC
GGCAACGCCT TAGAGTTCAA AGCCTTTGCT GATATCAATC AGCTCTTTGC CACTAACAAA
ATATCATGA
 
Protein sequence
MVQPFHLAIP VTNLTDAEAF YGELLGCEKG RSDSQWIDWN FFGHQLVTHC VEVMPSPPSY 
NGVDDHAVPV PHFGVVLTMS DWQALANKLE TANTEFVIAP YIRFKGKPGE QATMFFKDPF
GNALEFKAFA DINQLFATNK IS