Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00578 |
Symbol | |
ID | 6777016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 612424 |
End bp | 613593 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642754013 |
Product | Glucose dehydrogenase, putative |
Protein accession | YP_002124890 |
Protein GI | 196155401 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATCAT CAATTAGCGC GGTATTAAAG CGCAATCTAA CGAGCACGTT AACCCGCTCT ATTACCTTTG CATTAGCACT ATCTGCAAGC CAGTCTCTTT TTGCTCACGA AGGCCATGAG CACGGTATCA CCGACGAAAA TATTACGGTA ACCACCCTTG CTGAAGGGCT AGAACACCCC TGGGGGATGA CCTTTCTGCC TAATGGCGAC ATGTTGGTCA CAGAGCGCGC AGGGGGTATT CAGCGACTGA CAAAAGACGG GAAGTTGTCA GGACGGTTAG CGAACGTGCC CAGGGTAGTA GCGCAAAATC AAGGCGGCAT GCTTGATATC ACTATCGACC CTGATTTTGC TAGCAACAAC ACCATTTACT TTTGTTTCAG CAAAGCCAGT GATGTAGAAG GTAAAACAGG TAGCAGCAGT AGTGTGGCAA AAGCCACGTT AACGAATACC GGGCTAGAAG ATGTCAACGT GATATTTAGC GCCGATTCTA TTGTTGATAA CGGATTTCAC TTTGGTTGTC GCCTAGAATT TGATGCCAAT AAGTACCTAT ACGTTGCTAT GGGCGATCGC TACAAATACA TGAAGGAAGC GCAGAATACG GATAACCACT TTGGCAAAGT CGTGCGCATT AATCGCGATG GCAGCGCGGT AAAGGATAAC CCGTTCACTG ACGGCAACGC ACCAGAAGTA TTTAGCTATG GTCACCGCAA TATCCAAGGC GTAACAATTC ACCCTGACAC CGGTGCTGTA TGGGCAATGG AGCACGGTCC GAAAGGCGGT GACGAAATTA ATATATTGGA AAATGGCGCG AACTACGGCT GGCCTGAAAT TACCTATGGC ATTGACTACA GCGGTGACAT CATTAGTGAT AAAACGCATA TGGACGGCAT GAAGCAGCCT TGGGTATATT GGGACCCATC CATAGCGCCA AGTGGATTAA CTTTCTACCA AGGCGATATG TTTAAAGAGT GGAATGGTGA TGTGCTGGTT GGTTCTTTGA AGTTCACTCA CCTTCGCCGC ATTCACGTAG CAGACGGTAA GCCGGGCGAG CAGTTTGAAT ATCTGCGCGA CAACGGCGCA CGTATTCGCG ATGTGGAAGT TGGCCCTGAA GGTGCTATTT ACCTGTTAAC CGACGCACCA AATGGCAAAG TGTTGAAGCT CACTAAGTAG
|
Protein sequence | MKSSISAVLK RNLTSTLTRS ITFALALSAS QSLFAHEGHE HGITDENITV TTLAEGLEHP WGMTFLPNGD MLVTERAGGI QRLTKDGKLS GRLANVPRVV AQNQGGMLDI TIDPDFASNN TIYFCFSKAS DVEGKTGSSS SVAKATLTNT GLEDVNVIFS ADSIVDNGFH FGCRLEFDAN KYLYVAMGDR YKYMKEAQNT DNHFGKVVRI NRDGSAVKDN PFTDGNAPEV FSYGHRNIQG VTIHPDTGAV WAMEHGPKGG DEINILENGA NYGWPEITYG IDYSGDIISD KTHMDGMKQP WVYWDPSIAP SGLTFYQGDM FKEWNGDVLV GSLKFTHLRR IHVADGKPGE QFEYLRDNGA RIRDVEVGPE GAIYLLTDAP NGKVLKLTK
|
| |