Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00569 |
Symbol | |
ID | 6777095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 601448 |
End bp | 601786 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 642754003 |
Product | thioredoxin |
Protein accession | YP_002124881 |
Protein GI | 196155392 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.181003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAAAA GAATGAGCGA CAAAATTATC CAGTTATCTG ACGATAAATT CGAAGCAGAT GTTATCAATG CTGAAGGTCC TGTACTGGTT GACTTCTGGG CCGAATGGTG TGGCCCGTGT AAAATGATCG CACCAATCTT AGAAGAAGTT GCGACCGAGT TTGATGGCAA GTTAACAGTT GGCAAGTTGA ATGTCGATGA AAATAACGAA ACTCCACCTA AATATGGTAT TCGTGGTATT CCTACATTGC TACTTTTCAA AAACGGTAAC GTTGCTGCAA CGAAAGTTGG CGCGCTATCA AAAGCACAAT TAACAGAGTT TCTTAACGAA AACCTTTAA
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Protein sequence | MEKRMSDKII QLSDDKFEAD VINAEGPVLV DFWAEWCGPC KMIAPILEEV ATEFDGKLTV GKLNVDENNE TPPKYGIRGI PTLLLFKNGN VAATKVGALS KAQLTEFLNE NL
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