| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00564 |
|---|
| Symbol | |
|---|
| ID | 6777183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 594740 |
|---|
| End bp | 595516 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642753998 |
|---|
| Product | Mg-dependent DNase |
|---|
| Protein accession | YP_002124876 |
|---|
| Protein GI | 196155387 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0084] Mg-dependent DNase |
|---|
| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTGGT TCGATGCGGG TGTCAATTTG CTAGATAAGC GCTTTGACGC TGACGACATT
ATACAGCGGG CAAAAGATGC TGGCGTGGAA AAGCTCTGTA TTATTACCAC CCACCCTAAT
GAGTGGGACG TTGCCGTGTC TCTTTATAAC CAATACCCCG ATACGTGCTG TTACACAATT
GGGGTACATC CTCACAACGC TAAAGACGCT ACCCCGAACG ACCTGGCACG GTTACGTGAG
CTAGCCCAGC AAAAAGGGTG TGTAGCTATC GGTGAATGTG GGTTGGACTT TAATCGAAAT
TTCTCTCCCC AGCCTGTTCA GCTGTCGATT TTTGAAGCGC AGCTAAAAAT AGCCGCAGAT
GTAAGCCTGC CAGTGTATCT GCATGAAAGA GACGCGTTTG ACGAACAGCT GTCTCTTCTA
ACCCGATATA TGCCAAATTT ACAAGGCGGC ATCGCTCACT GTTTCACCGG TAACGCCGAA
CAAGTAAAGC AGTATCTAGC CTTAGACCTA TATATCGGTA TTACGGGCTG GGTGTGTGAT
GAAAAACGGG GTGAAGCGTT ACGAGAAGCC GTAAAGCACA TTCCGCTTGA ACGCCTTATA
TTAGAAACAG ACGCGCCATA TCTCTTTCCC AAAACATTGC GCCCGAGAAA GCGTAATAAT
GAACCCGCGT TTTTGCCTCA CATTGCTAAT CAATTAGGCG AATATCTGCA AGTTGAGACT
GATAAATTGC GTATTAGCAG TTATGCTAAT ACTTGTGAGT TGTTTTCTCT CAGCTAA
|
|---|
| Protein sequence | MPWFDAGVNL LDKRFDADDI IQRAKDAGVE KLCIITTHPN EWDVAVSLYN QYPDTCCYTI
GVHPHNAKDA TPNDLARLRE LAQQKGCVAI GECGLDFNRN FSPQPVQLSI FEAQLKIAAD
VSLPVYLHER DAFDEQLSLL TRYMPNLQGG IAHCFTGNAE QVKQYLALDL YIGITGWVCD
EKRGEALREA VKHIPLERLI LETDAPYLFP KTLRPRKRNN EPAFLPHIAN QLGEYLQVET
DKLRISSYAN TCELFSLS
|
|---|
| |