Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00562 |
Symbol | |
ID | 6777248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 593422 |
End bp | 594177 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642753996 |
Product | Sec-independent periplasmic protein translocation protein TatC |
Protein accession | YP_002124874 |
Protein GI | 196155385 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGACG CTAACAACCT AATTTCTCAT TTAATTGAAC TGCGCAGTCG TATTCTCAAA GCGCTTTTGA GTGTACTGGT TGTGTTTATT TGTCTAGCCG CATTTGCACA GGACCTTTAC CAGCTATTAG CGATGCCGCT GCTTGAAACC CTGCCTGAAA ATTCAAGTAT GATTGCAACT GACGTTGCGT CACCTTTTTT CGCACCTTTC AAGCTAACGC TGGTGTTATC ATTTTTTATT GCGATCCCCT ATGTGCTGTA CCAAGTGTGG GGCTTTGTGG CTCCCGGGTT ATACCGCAAT GAAAAGCGTC TAGTGGCACC GTTATTACTT TCAAGCACGC TACTTTTTTA CGCAGGCATG GCTTTCGCCT ATTTCGTGGT ATTTCCGATA GCCTTTGCGT TTTTTACTAG TGTTGCGCCA GAGGGAGTAA CGGTAAGTAC GGACATCTCA AGCTATTTAA ACTTCGTATT GAAACTGTTT TTCGCATTTG GGGTCTCATT CGAGATACCA ATAGCCATTA TTTTAATGTG TTGGACCGGG GTCACCGATG CTAAATCATT ACGCGCCAAG CGCCCCTATG TGGTTGTTGG TGCTTTTGTT GTGGGTATGT TGCTAACCCC CCCTGATATT ATCTCTCAAA CACTATTAGC GATTCCCATG TGGCTGTTGT TCGAGGTTGG GGTCATTGTG GGTGGCTTTT ACGCAGGCAA GAAACCTAGC GATGAAGTCT CAGAAGAGTC GCCTGACAAC ACATAA
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Protein sequence | MSDANNLISH LIELRSRILK ALLSVLVVFI CLAAFAQDLY QLLAMPLLET LPENSSMIAT DVASPFFAPF KLTLVLSFFI AIPYVLYQVW GFVAPGLYRN EKRLVAPLLL SSTLLFYAGM AFAYFVVFPI AFAFFTSVAP EGVTVSTDIS SYLNFVLKLF FAFGVSFEIP IAIILMCWTG VTDAKSLRAK RPYVVVGAFV VGMLLTPPDI ISQTLLAIPM WLLFEVGVIV GGFYAGKKPS DEVSEESPDN T
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