Gene MADE_00550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00550 
Symbol 
ID6777906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp581070 
End bp582113 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content47% 
IMG OID642753982 
Productribosome-associated GTPase 
Protein accessionYP_002124862 
Protein GI196155373 
COG category[R] General function prediction only 
COG ID[COG1162] Predicted GTPases 
TIGRFAM ID[TIGR00157] ribosome small subunit-dependent GTPase A 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.582622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAAA AACCAAAACT TACACAACGA CAGAAACGAC AAGTTGCAGC AAACAGAAGC 
AAACGCTTGC GTGAAAAGCA CGGCGCTAAA GATGCTTCGA GTCTGGACGA AAGCGCGTTA 
GAGAGCGGTA CTGTAATTGG CCGCTTCGGC AAACATGCCG ATGTTGAAGA TACCAATGGC 
GAAGTTTCCC GCTGCCATAT TCGCCGTACA GTCGACTCTG TAGTGTGCGG AGACAAAGTC 
TTTTTCAGCA AAGGGGATGA TGCTGAGTCG GGGGTAAGAG GTGTTATCGA AATAGTAAAA 
GACAGGCACT CCGTGCTCAC TCGCCCCGAT TATTACGACG GTATCAAACC CATTGCCGCG 
AATATCGACC GTATTATTGT GGTTAGCTCT ATTTTACCTT CTCTTTCACT GAATATAATC 
GACCGCTATT TGGTGGCCTG TGAAGATATT GGCATTACGC CACTTATTGT ACTTAATAAA 
GTAGAGCTGC TTAGCGATGA AGAACGCGCA ACCGTCACAG AGCAGCTTAA AACCTATGAA 
AAACTAGGCT ACGAAGTGCT GTTTACCAGC TGTAAAACTG GCGAGGGTAT TAATACACTT 
AACGAATACC TTAATGATAA TATCAGCGTT TTCGTGGGGC AGTCGGGCGT TGGTAAATCG 
AGCCTTATTA ACCAGGTTCT GCCAGATGCC GATGAATTAA CCGGTGATAT CTCAGATAAC 
TCAGGGCTGG GTCAACACAC CACCACCGCT GCTAAACTGC TTCATTTACC GGCTGGGGGT 
GATTTAATTG ATTCTCCAGG AGTACGTGAG TTTGGCCTGT GGCATATTCC CGTTGAGCGT 
ATCACATGGG GTTTTATTGA GTTTAGAGAC TATTTAGGCG GCTGCAAATT TCGCGACTGC 
AAGCACTTAA ACGATCCGGG CTGCTTGTTA AGAGAAGCGG TTGAAGAAGG GAAAATCAGT 
GCAGAACGCT TTGACAGCTA CCACCGAATA TTAACCACGA TGGAAGAGCA GCGTCCTAGC 
CATAGTCAGC CCCCAGGTGC ATAA
 
Protein sequence
MAKKPKLTQR QKRQVAANRS KRLREKHGAK DASSLDESAL ESGTVIGRFG KHADVEDTNG 
EVSRCHIRRT VDSVVCGDKV FFSKGDDAES GVRGVIEIVK DRHSVLTRPD YYDGIKPIAA 
NIDRIIVVSS ILPSLSLNII DRYLVACEDI GITPLIVLNK VELLSDEERA TVTEQLKTYE 
KLGYEVLFTS CKTGEGINTL NEYLNDNISV FVGQSGVGKS SLINQVLPDA DELTGDISDN 
SGLGQHTTTA AKLLHLPAGG DLIDSPGVRE FGLWHIPVER ITWGFIEFRD YLGGCKFRDC 
KHLNDPGCLL REAVEEGKIS AERFDSYHRI LTTMEEQRPS HSQPPGA