| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00544 |
|---|
| Symbol | |
|---|
| ID | 6777949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 575421 |
|---|
| End bp | 576584 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642753976 |
|---|
| Product | peptidase, M23/M37 family protein |
|---|
| Protein accession | YP_002124856 |
|---|
| Protein GI | 196155367 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG4942] Membrane-bound metallopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTAC GGTCATTACT TTCAATCATA GGGTGTATTA TTGCACTCGC TACTCTGCCG
ATTGGAAGTG GTGCTATTGC GCAAGAAGCC GGGGCCAGTG CGCAAAAAGA GAAGTTAGCA
GAACTACAGG CAGAGCTTCG CGCGCGCCAA CAGGTATTAA AAAATAATAA AGCCAGTGCG
CAAGAGCTAA AAAGTGTACT TAAAGCCTCT GAACTTGAGA TAGCGAAAGT CGCCAAGGCA
TTAGCCATTA CTCGTCAGTC GCTTGCCAAT GTAGAGCAAG AACAAGCAAA GCTTGGTGCT
GAGCAAGAAA CCCTTAAAGC GGCTATTCGC AAACAGCAGT CTTTATTATC TAGTCAATTA
AAAAGTGCTT TTATGGCGGG GCATTACGAC TACGCAAAAA TGTTGTTTTA TCAAGATGAC
GCCCGCACAT TTGAACGCGT AATTACCTAT TACCAATATG TTGCTAAAGC TCGTCAAAAA
GAGATTGAAA GTTTTAGAAG CAATGTAGCA AGGCTTGAGG AAGTTAACGC TGAACTCGAT
GAAAAAGCGC AATCGCTTGC CGCTCTTAAA GAAGAGCAAG AAGGTCAGCG CGCGGTGCTC
ATAACGCGCC AAGCCGACCG TAAAAAAACA CTCACAAAAA TCAATAAAAC TATAGCGTCG
GAAAACCAAA GAATTGCTTC ATTGCAGGCC GATGAAAAAG CCCTTAGAGA TGCTATAGAG
GCCGCGCGTA TAGCCGCTGA ACGAGCTGCA AGGAATGCGG AAGTATCTAT GGACGGACTA
GCGAAGCTCA AAGGAAAGTT AACGCCGCCA GTGAAAGGGA GAGTTCGAAA GCTATTTGGT
AGCCGCCGCC AAGGGCAAGT ATCTTGGAAA GGTATTATCA TTGATGGTGC AGAAGGCGAC
CCTGTCAATA GCATCGCCCC TGGTAAAGTC CTCTACGCCG ATTGGCTTCG TGGTTTCGGG
TTGGTTGCTA TTATTGACCA TGGTAAAGGC TACATGAGCG TGTATGGGCA CAATCAAGCT
TTGCTTAAAC AGGCTGGTGA CGATGTTAGA CGGGGCGAGC GAATAGCCCT TGTTGGGCGA
AGTGGCGGTC AGGAATATCC TAACCTTTAC TTTGAAATTC GCCACAAAGG TAAAGCCCTT
AATCCAAGCT CGTGGCTAGA CTGA
|
|---|
| Protein sequence | MSLRSLLSII GCIIALATLP IGSGAIAQEA GASAQKEKLA ELQAELRARQ QVLKNNKASA
QELKSVLKAS ELEIAKVAKA LAITRQSLAN VEQEQAKLGA EQETLKAAIR KQQSLLSSQL
KSAFMAGHYD YAKMLFYQDD ARTFERVITY YQYVAKARQK EIESFRSNVA RLEEVNAELD
EKAQSLAALK EEQEGQRAVL ITRQADRKKT LTKINKTIAS ENQRIASLQA DEKALRDAIE
AARIAAERAA RNAEVSMDGL AKLKGKLTPP VKGRVRKLFG SRRQGQVSWK GIIIDGAEGD
PVNSIAPGKV LYADWLRGFG LVAIIDHGKG YMSVYGHNQA LLKQAGDDVR RGERIALVGR
SGGQEYPNLY FEIRHKGKAL NPSSWLD
|
|---|
| |