Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00536 |
Symbol | |
ID | 6778065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 569255 |
End bp | 570616 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642753968 |
Product | putative sensor histidine kinase protein |
Protein accession | YP_002124848 |
Protein GI | 196155359 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAAAC TGCTACGCAG CGTAAGCCCA ACGCGGGCCA TCATGGGCCG ATTGTTTTTA TGGTTTTGGG CTACGTTTAT TGTCACCGCC TTGCTGGCTA TTTGGGGCAG CCGCCTTTTC TTTGAAGATC TTGAAATTGT ACCGATAAAA CCACGTGAAG TGGCTGCTCT CAATCAAGTG GTGGAGCGCA TACAAGATAA CCGTTACCAA GGTGCACCAT TACGCGGAGC GCTTGACCGC CATTCTCGGG GAGGGAGAGG GCGAATGGTG GCTATTGATA TTAGTGATAA CCGCGTTATT TCTGGTGGTG GCCCACCGCT TCGTAACGAG GACAAAGAAG ATTTACTTCG ATTAGTCACA CAAACGTCAC CCATAGCGGT GAAGCGGGGA GCATTTAAAA TTTTGGGGCC GGTTTTCTTC GAGCGAGACG GCTCCCGATT TGCGCTTTTT TCAGTGAGAC TGGAAATGCC TGAAAAGCAA ACTCCACCGA TTTTACTGTT CCTAACCATC GCCTTGATTA CCACCATATT ATTGAGCTGG TTGTTTGCGA AATCACTGAC TAACCCCATA CTGCGTATAC AAAGCTCAGC GAAACGCATA GCGAGCGGTG ACTGGCAGGC GCGAGTAGGC CGAGCGGCTA AGCGTCAGGA CGAGCTAGGG CAGCTTTCGC GGGACTTTAA CAAGATGGCA GAACAGCTAG AGTCCATGTG GGGCGCCCAA AAACGCCTAT TGGCCGATGT CTCTCATGAA CTACGCTCAC CGCTTGCCCG CTTACAAATG GCATTAGGAC TTGCGCATCA GCAAAACGTA GATCCTGAAA CCTTAGCGCG TGTAGAGCGA GAAGCCGATC GGATGGAAGC GTTAGTGAGT CAACTTCTCA CCTTGAGTAA AGCTGAAGCT GGTGAAGCAT CTATGCAAAA GCAAATGCTG TCGCTTGTAC TAAACGATGT GTTTACCGAC GCGAATTTTG AGGCGGCAAA TAAAAACAAG CAGCTTCAAA TTGATGACAT ACCTCAAAAG ACAGTGGTTA TCGATAGTAT GATGTTTTGT CGTGCAATAG AAAATGTATT GCGCAACGCA ATTCGTCATA GCGCGCTTGT TACCCGTATC TCGTTTAGCG AGGATTCAGA GCACTGGTGT ATTCATATTG CTGATGATGG TGAAGGGCTC TCCCATGAAG AGTGTGAACG CATCTTTTCT CCCTTTTATC GAGCAACGCT TGCCAGAGAG CGGGAGTCCG GGGGCGTGGG CTTAGGTTTA TCCATTGCAA AAGCAGCCGT GGAGTTGCAT CATGGAAGGA TTATTGCTGA ACCGGCTGAG CGCGGTGGGC TTAAAGTAAC CTTGTCTTTT CCTAAGTCGT AA
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Protein sequence | MVKLLRSVSP TRAIMGRLFL WFWATFIVTA LLAIWGSRLF FEDLEIVPIK PREVAALNQV VERIQDNRYQ GAPLRGALDR HSRGGRGRMV AIDISDNRVI SGGGPPLRNE DKEDLLRLVT QTSPIAVKRG AFKILGPVFF ERDGSRFALF SVRLEMPEKQ TPPILLFLTI ALITTILLSW LFAKSLTNPI LRIQSSAKRI ASGDWQARVG RAAKRQDELG QLSRDFNKMA EQLESMWGAQ KRLLADVSHE LRSPLARLQM ALGLAHQQNV DPETLARVER EADRMEALVS QLLTLSKAEA GEASMQKQML SLVLNDVFTD ANFEAANKNK QLQIDDIPQK TVVIDSMMFC RAIENVLRNA IRHSALVTRI SFSEDSEHWC IHIADDGEGL SHEECERIFS PFYRATLARE RESGGVGLGL SIAKAAVELH HGRIIAEPAE RGGLKVTLSF PKS
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