Gene MADE_00536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00536 
Symbol 
ID6778065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp569255 
End bp570616 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content49% 
IMG OID642753968 
Productputative sensor histidine kinase protein 
Protein accessionYP_002124848 
Protein GI196155359 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAAC TGCTACGCAG CGTAAGCCCA ACGCGGGCCA TCATGGGCCG ATTGTTTTTA 
TGGTTTTGGG CTACGTTTAT TGTCACCGCC TTGCTGGCTA TTTGGGGCAG CCGCCTTTTC
TTTGAAGATC TTGAAATTGT ACCGATAAAA CCACGTGAAG TGGCTGCTCT CAATCAAGTG
GTGGAGCGCA TACAAGATAA CCGTTACCAA GGTGCACCAT TACGCGGAGC GCTTGACCGC
CATTCTCGGG GAGGGAGAGG GCGAATGGTG GCTATTGATA TTAGTGATAA CCGCGTTATT
TCTGGTGGTG GCCCACCGCT TCGTAACGAG GACAAAGAAG ATTTACTTCG ATTAGTCACA
CAAACGTCAC CCATAGCGGT GAAGCGGGGA GCATTTAAAA TTTTGGGGCC GGTTTTCTTC
GAGCGAGACG GCTCCCGATT TGCGCTTTTT TCAGTGAGAC TGGAAATGCC TGAAAAGCAA
ACTCCACCGA TTTTACTGTT CCTAACCATC GCCTTGATTA CCACCATATT ATTGAGCTGG
TTGTTTGCGA AATCACTGAC TAACCCCATA CTGCGTATAC AAAGCTCAGC GAAACGCATA
GCGAGCGGTG ACTGGCAGGC GCGAGTAGGC CGAGCGGCTA AGCGTCAGGA CGAGCTAGGG
CAGCTTTCGC GGGACTTTAA CAAGATGGCA GAACAGCTAG AGTCCATGTG GGGCGCCCAA
AAACGCCTAT TGGCCGATGT CTCTCATGAA CTACGCTCAC CGCTTGCCCG CTTACAAATG
GCATTAGGAC TTGCGCATCA GCAAAACGTA GATCCTGAAA CCTTAGCGCG TGTAGAGCGA
GAAGCCGATC GGATGGAAGC GTTAGTGAGT CAACTTCTCA CCTTGAGTAA AGCTGAAGCT
GGTGAAGCAT CTATGCAAAA GCAAATGCTG TCGCTTGTAC TAAACGATGT GTTTACCGAC
GCGAATTTTG AGGCGGCAAA TAAAAACAAG CAGCTTCAAA TTGATGACAT ACCTCAAAAG
ACAGTGGTTA TCGATAGTAT GATGTTTTGT CGTGCAATAG AAAATGTATT GCGCAACGCA
ATTCGTCATA GCGCGCTTGT TACCCGTATC TCGTTTAGCG AGGATTCAGA GCACTGGTGT
ATTCATATTG CTGATGATGG TGAAGGGCTC TCCCATGAAG AGTGTGAACG CATCTTTTCT
CCCTTTTATC GAGCAACGCT TGCCAGAGAG CGGGAGTCCG GGGGCGTGGG CTTAGGTTTA
TCCATTGCAA AAGCAGCCGT GGAGTTGCAT CATGGAAGGA TTATTGCTGA ACCGGCTGAG
CGCGGTGGGC TTAAAGTAAC CTTGTCTTTT CCTAAGTCGT AA
 
Protein sequence
MVKLLRSVSP TRAIMGRLFL WFWATFIVTA LLAIWGSRLF FEDLEIVPIK PREVAALNQV 
VERIQDNRYQ GAPLRGALDR HSRGGRGRMV AIDISDNRVI SGGGPPLRNE DKEDLLRLVT
QTSPIAVKRG AFKILGPVFF ERDGSRFALF SVRLEMPEKQ TPPILLFLTI ALITTILLSW
LFAKSLTNPI LRIQSSAKRI ASGDWQARVG RAAKRQDELG QLSRDFNKMA EQLESMWGAQ
KRLLADVSHE LRSPLARLQM ALGLAHQQNV DPETLARVER EADRMEALVS QLLTLSKAEA
GEASMQKQML SLVLNDVFTD ANFEAANKNK QLQIDDIPQK TVVIDSMMFC RAIENVLRNA
IRHSALVTRI SFSEDSEHWC IHIADDGEGL SHEECERIFS PFYRATLARE RESGGVGLGL
SIAKAAVELH HGRIIAEPAE RGGLKVTLSF PKS