| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00525 |
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| Symbol | |
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| ID | 6778096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 557201 |
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| End bp | 559162 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642753957 |
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| Product | sensory box/GGDEF family protein |
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| Protein accession | YP_002124837 |
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| Protein GI | 196155348 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.737023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGCGG TGGTAGGGGC CTCGCTATGT ATTTTATTTT TCACTCTCGA CCTTATGTCA
GCAAGGTATG GTCTGTTACT GCTATTTACA CTGCCTATTA TTGTTAGGGT GTTGTATGGC
GTGAAAGCAT CTATTGCCAG TATGTTATTG AACTTTATTC CTTTTTACCT GTTACTCAAT
AACACCCAGC TTTCGCCATT ATTCGGTATC GACATTACAT TGCCAGATAC CCATACTTAC
CTTGCCTCGT TAATCTTTTT GTTCTTTAAC TTTTGCATTC CCATGGCTGT GTTACGCGTT
ATGTCTTCAC TTGAAAGGCA AGCTGAACAT AACTTGCTAC AAAGTAAAAA GCTCAATAAG
TTAGTTAGCC GTTATCAAGA AATTTTTAAT AACGGCGGAA CGCCGTCATT TTTTTGCGAT
GACAAAGGGC GAATTTTGCA AGCGAACAAA GCGGCACGGG CACTTTTGAA AAGGCACAAT
CCTGATGGTG AATACATTCA AGATCTCTTC GCCCTTTCGT TACCCATAAC TCGCGGAGTC
AATCAGCTTG CCTCTATCTG CAATGCTCCC GAACGAGAAT TCAAGCTACA GCCAGCCAGT
TTAGAGCATC ACAAAAAGCA GCTGATCCAC TGCCACGATT TATCTGCGTC AAAAAAGAAT
ATGCGTGAAT TCGATGCATT CAAAAAGCAG CAGTTTGAAA AGCTCTACGT CAATGAACTC
ACTGGATTAA AAAACCACCA CTTCTGGAAA AAGACAGAAT CGAGTGAGAG CATTTTAAAT
CGCCATATTG TGCTATTGAA ATTAGCCAAT TTGCGAGAGG TCAATCTGCA GTATGGTTAT
AGTCAGGGTG ATCAACTCCT GTTGCGTGCT GCGGCGCTAC TCCAAAGTGA ATTGCCGACC
GATGTTAGTA TCTACCAATT CCCTGGGGCG AAGTTTCTAT TTACGCTAAA CACTAAACAC
CTTGCTCAAA AAACTATCGA GGAATATTTA GCGCGTAAGT TACCCTCAAG CATGATGATA
GATTCGGCCA GCGCAAAAGT GGAACATCCC TTATCATGGC GCGTCGGTCA TTATCACGCA
ACTAGAGAGA TTAACGTTGA TGCTGCGGCA GAATGCTGCG CTATCGCCTT AAGCCAAAGC
AGTGAACTTT CACCAATTGT ATCGTTCAGA GTCAACACGG TAAAAACCAT TAGGGAAAAC
ACCCAGCAGA AAGACAACGT AAAAATGTTG CTCGATAACG GCTGTCTCGC CTTGTACCTT
CAGCCACAGG TCGACATTAA CGGTAACATT GTCGGTTATG AAATACTTGC GCGGTTAAAA
GAGCCAAAAA CAGGAACCGT GCTTCAACCT TATCAGTTTC TTCCTCTGGT GGAACAAAAT
AAATGGGAAG TGCTTTTTAC TCAGAAAATT ATCGATGGCA CGCTTGAACT TATCAAGTCG
TGGCCGGCAG GCTTGCCCCC TGTTCCGTTA GCCATTAATT TGTCTGGGCC TGAATTGCTC
AGCGATCTCT TCTATGAAAA GCTTTTGCGT CGCTATTCTG AAAGCCCTGA ACTCGGTAAG
CGATTAAAAT TAGAGCTTAC GGAGACGTCA GTACTGGCCA GCCACAATGA AACCAAGCGT
CGCTTAACGT CTTTGTCGAA CGTAGGGGCC ACCATTATTA TTGACGATTT TGGTACTGGT
CACGCGTCAC TATCGCAACT GATTGATATG TCAGCAAGTA TTATAAAGGT GGACCGAGAG
TTCGTGGAAC GGGTAGAAAC CTCTGAGCGA CACCGAAAAA TCGTTAAGAT GACGTTAGAC
CTAGCTAAGA GTTTAGAAAT GCAGACAATC GCAGAGGGGG TAGAAACACG CGCCCAATTG
TCAGTACTAA AAGACATGGG GTTTAAACAT TTTCAAGGTT ACCTCTTCGG TAAACCAGCC
CCCATCGAGC ACTGGATAAG TGCATCAAAA GCGCAGGCTT AA
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| Protein sequence | MLAVVGASLC ILFFTLDLMS ARYGLLLLFT LPIIVRVLYG VKASIASMLL NFIPFYLLLN
NTQLSPLFGI DITLPDTHTY LASLIFLFFN FCIPMAVLRV MSSLERQAEH NLLQSKKLNK
LVSRYQEIFN NGGTPSFFCD DKGRILQANK AARALLKRHN PDGEYIQDLF ALSLPITRGV
NQLASICNAP EREFKLQPAS LEHHKKQLIH CHDLSASKKN MREFDAFKKQ QFEKLYVNEL
TGLKNHHFWK KTESSESILN RHIVLLKLAN LREVNLQYGY SQGDQLLLRA AALLQSELPT
DVSIYQFPGA KFLFTLNTKH LAQKTIEEYL ARKLPSSMMI DSASAKVEHP LSWRVGHYHA
TREINVDAAA ECCAIALSQS SELSPIVSFR VNTVKTIREN TQQKDNVKML LDNGCLALYL
QPQVDINGNI VGYEILARLK EPKTGTVLQP YQFLPLVEQN KWEVLFTQKI IDGTLELIKS
WPAGLPPVPL AINLSGPELL SDLFYEKLLR RYSESPELGK RLKLELTETS VLASHNETKR
RLTSLSNVGA TIIIDDFGTG HASLSQLIDM SASIIKVDRE FVERVETSER HRKIVKMTLD
LAKSLEMQTI AEGVETRAQL SVLKDMGFKH FQGYLFGKPA PIEHWISASK AQA
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