| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00511 |
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| Symbol | |
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| ID | 6777144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 542000 |
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| End bp | 543643 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642753943 |
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| Product | putative type IV pilus biogenesis protein PilQ (cytoplasmic ATPase) |
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| Protein accession | YP_002124823 |
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| Protein GI | 196155334 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.440225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGTAG ACCCCAATGC AACGCAAAAT GCGTTATCGA AAAGCTCAAC CATAACCAAC
ATTGACTTTA CGCAAGCTGC CAATAATACC GCAGTCACTT TAGTCGAGTT TGAAGGTGAG
GCTCCTAAAG TTCAGCTTAT AGAATCTCAA GGTAAAGTGT CGCTTACACT GGCAAACGCC
ACCTTAGGCG AAGACCAGTT GTTAGAGTTA AATGTAGCCG ACTTTGGCAC AATGGTATCG
ACCATAGAAA CCTTTGAAGA CAAAGATGGT GCGAGAATAG AAATTAACTA CTCAGGTCCG
GTAACCGTTA GAAATACGGT TAAAGACGCT GTACTTCGCA TTGCCATTTC ACCCATGGAT
AGCGAACAAC AAGAAGCACT AGAAGCCGAG AAAAAGTACA CGGGCGACCC TATTTCCCTC
GACTTTCAAG ATGTACCTGT TAGGCAAGTT TTACAAATTA TTGCGCAGGT TAACGGTTTT
AACCTTGTGA CCACCGACAC GGTGTCAGGA AACGTTACGA TCAGTTTGTC TGGTGTTCCC
TGGGATCAAG CGCTAGATAT GATTTTGCGT GTGAAAGGGC TAGATAAACG CCTAGAAGGC
AATATTCTTC TTATTGCGCC TGCTGAAGAG CTTTCAGCCC GCGAGACACA AGCCCTTCAA
TCGAAAAAGC AGGTGTCAGA TTTAGCGCCG CTTCACACCG TTAATATTTC AGTTAACTAC
GCTAAGGCTG CGGCACTTGC CACTATTTTG AAGTCGACAG AAGGCGGTAT TCTTTCAGAA
AGAGGTGGAG TGACCGTGGA CGAGCGTACT AATACCTTAC TTATTCGCGA CACTTTAGCC
TCAATTGATG AAGCTAGAAA GACGATCAAT GCGTTGGATA TTCCGGTTAA ACAGGTGCTT
ATTGAAAGTC GCATGGTTAC CGTACTAGAC GACGTTGATG AACAGCTAGG CGTGCGCTGG
GGCTTTAGTG ACCGCCAGGA TGACAATGGC ATATCAGGCA GTATTGAAGG TGCAGATACC
ATTGCTGGTG GCGTTGTGCC AAGTATTGAA AACCGTCTTA ATGTTAACCT TCCGGTAAGC
AGCGCAGCAG GTAGTATCGG TTTTCAGATA GCCAGCTTGG TAGATGGCAC CATACTCGAT
TTGGAACTGT CTGCATTAGA ATCGGAAAAT AAGGGCGAAA TTATTGCAAG CCCGCGTATT
ACCGTTGCAA ACCAGCACGA AGCGTACATT GAACAAGGTA CCGAAATTCC TTATGTTCAA
GCCACCTCGA GTGGTGCTAC GTCAGTAGAA TTCAAAAAAG CGGTACTGTC GCTTAAAGTA
ACGCCGCACA TCACCCCTGA TAATCGCATT ATTCTTGATT TAGTGGTGAC ACAAGATACC
CGAGGTGAGA CGGTAACAAC CTCTACAGGG GATGCCGTAG CTATTGACAC CCAAGAGATT
AAGACACAAG TCTTAGTGGA AAATGGTGAA ACCATTGTGC TCGGTGGTAT TTTTCAGCAA
ACCAGCTCTG ACGGTGTGTC AAAAGTACCG CTATTTGGTG ATTTGCCCCT TGTTGGCGCG
CTATTTAGAA ACTCATCTCA GCTTCAACAA AAACGTGAGC TTCTTATCTT CGTAACACCT
AAGATAGTGA CAGAACGACC ATAA
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| Protein sequence | MLVDPNATQN ALSKSSTITN IDFTQAANNT AVTLVEFEGE APKVQLIESQ GKVSLTLANA
TLGEDQLLEL NVADFGTMVS TIETFEDKDG ARIEINYSGP VTVRNTVKDA VLRIAISPMD
SEQQEALEAE KKYTGDPISL DFQDVPVRQV LQIIAQVNGF NLVTTDTVSG NVTISLSGVP
WDQALDMILR VKGLDKRLEG NILLIAPAEE LSARETQALQ SKKQVSDLAP LHTVNISVNY
AKAAALATIL KSTEGGILSE RGGVTVDERT NTLLIRDTLA SIDEARKTIN ALDIPVKQVL
IESRMVTVLD DVDEQLGVRW GFSDRQDDNG ISGSIEGADT IAGGVVPSIE NRLNVNLPVS
SAAGSIGFQI ASLVDGTILD LELSALESEN KGEIIASPRI TVANQHEAYI EQGTEIPYVQ
ATSSGATSVE FKKAVLSLKV TPHITPDNRI ILDLVVTQDT RGETVTTSTG DAVAIDTQEI
KTQVLVENGE TIVLGGIFQQ TSSDGVSKVP LFGDLPLVGA LFRNSSQLQQ KRELLIFVTP
KIVTERP
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