| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00509 |
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| Symbol | |
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| ID | 6777451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 540115 |
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| End bp | 541167 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642753941 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_002124821 |
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| Protein GI | 196155332 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0026349 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTTG GAGAACGTAG CTATCCTATA CAGATAGAGG CTGGGCTGCT TTCGCAACCT
GGCCTTTTTA GTGCCTACAT AAAAGGCCCG CTTGCCGTTA TTGTGACCAA CGAAACCGTT
GCTCCACTTT ATCTTGAAAC GGCGAAGGCG GCATGTGGTG ACGTTCACGT TGAAACCATT
ATCTTGCCTG ACGGTGAGCA GCATAAAAAT TTAGCGCAGT TCGAAGTTGT GATGACCCGC
CTTCTTGAGC TTAACGCCGC CAGAGATACC ACGCTAATTG CATTAGGTGG CGGCGTAATC
GGTGACCTCA CAGGCTTTGT TGCAGCGACC TATCAAAGGG GCGTGCCTTT TATTCAGGTT
CCTACCACAT TACTTTCTCA AGTAGACTCA TCGGTTGGCG GTAAAACGGC GGTAAACCAC
CCTCTAGGTA AAAACATGAT TGGTGCATTT TACCAACCTG TTTATGTTGC TATCGATACC
GACTCGCTGG CGACACTACC GCCAAGAGAA TTTGCTGCAG GTATGGCAGA AGTGATTAAA
TACGGCATCA TTTACGATGC TGACTTTTTC ACTTGGCTTG AAGAAAACGT AAATGCACTC
ACTTCACTAG ACACAAGCAT CCTAACCCAA GCTATTTCCC GCTGTTGTGA AATTAAAGCC
GATGTTGTTG CTAAAGACGA GCGAGAAGGT GGTCTGCGCG CCATTCTCAA TTTAGGCCAC
ACGTTTGGAC ACGCAATTGA AGCAGAGCAA GGATATGGCA ATTGGTTACA TGGCGAAGCG
GTGGCCGCTG GTACTATACT TGCTTGTAAA GCTGCAGAAG GTTTATCGTG GTTTTCAGCG
TCAGAAACAC GTCGCGTGTC TGCGCTATTT GAAGCGTTTA CATTGCCTGT TAAAGGGCCA
AGTAGCATGA CTAAGGACGA CTACGTTAAG CACATGAAAC GCGATAAAAA GGTGGAAGCA
GGCAATATTC GTTTTGTCCT TCCCCAAGGT ATTGGCAAAG CGGTGGTCAC CAAGGACGTT
ACCGACGACA TTCTAACTGA CATTATTGCT TAG
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| Protein sequence | MELGERSYPI QIEAGLLSQP GLFSAYIKGP LAVIVTNETV APLYLETAKA ACGDVHVETI
ILPDGEQHKN LAQFEVVMTR LLELNAARDT TLIALGGGVI GDLTGFVAAT YQRGVPFIQV
PTTLLSQVDS SVGGKTAVNH PLGKNMIGAF YQPVYVAIDT DSLATLPPRE FAAGMAEVIK
YGIIYDADFF TWLEENVNAL TSLDTSILTQ AISRCCEIKA DVVAKDEREG GLRAILNLGH
TFGHAIEAEQ GYGNWLHGEA VAAGTILACK AAEGLSWFSA SETRRVSALF EAFTLPVKGP
SSMTKDDYVK HMKRDKKVEA GNIRFVLPQG IGKAVVTKDV TDDILTDIIA
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