Gene MADE_00502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00502 
Symbol 
ID6777427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp533666 
End bp534673 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content46% 
IMG OID642753934 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_002124814 
Protein GI196155325 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATA AACCCGTTGT ATTAAGTGGC TGTCAGCCTT CAGGCCAACT TACCCTTGGC 
AATTACATGG GTGCGCTTAA GCATTGGGTT TCCATGCAAG ACGATCACGA CTGCTTGTAT 
ATGATTGTAG ACTTGCATGC CATTACGGTA AGACAAGACC CCAAGCAGCT AGCAGAAGCG 
TGCTTAGACG GCCTTTCTCT TTACCTTGCG TGTGGTATTG ACCCACAAAA AAGCACGCTG 
TTTTTACAAT CCCATGTGCC GGAACACGCT CAGCTCTCAT GGGTTCTCAA TTGCTATGCT 
CAAATGGGTG AGCTAAATCG CATGACTCAG TTTAAAGATA AGTCGGCGAA AAACGAAAAT 
AATATCAACG TTGGTTTATA TAGCTACCCT GTGCTTCAGG CTGCCGATAT TTTGCTTTAT 
CAAGCAGATA AGGTACCAGT AGGTGAAGAC CAAAAGCAGC ACTTAGAGTT GACCCGCGAT 
ATCGCAACCC GCGTGAATAA CCTATATGGC GATGTGTTTA AATTGCCTGA CCCTTACATC 
CCAGATTTCG GCGCGCGCAT TATGAGCTTG CAAGAGCCGG AAAAGAAGAT GTCGAAGTCA 
GACAATAATC CGAACAACTT TATTGGTCTG TTAGAAGAAC CCAAGAAGTT GGCGAAGAAG 
ATTAAGCGCG CGGTAACGGA CTCTGACGAG CAAGCCAATA TTTATTTCAA CCCAACAGAA 
AAGCCTGGTG TATCTAACTT ACTTACCCTG CTTTCTCTTT CTACCGGAAA ATCGATTAAA 
GCGCTTGAAC CTGAGTATAC CGACAAAATG TACGGCCATC TTAAAGGCGA TGTCGCAGAC 
GCCGTCGTCG CGTTACTAGA GCCAATTCAA GCGCGTTATG CCGAAATTCG AGCAGACCGA 
GCTTACCTTG ACGATGTTAT GCGTCAGGGT GCGGAAAAAG CGTCTGCTCG CGCTGCAGAA 
ACGCTCGCAA AGGTATACAA CGCGGTTGGT TTTATACCTA AGCCATAA
 
Protein sequence
MSNKPVVLSG CQPSGQLTLG NYMGALKHWV SMQDDHDCLY MIVDLHAITV RQDPKQLAEA 
CLDGLSLYLA CGIDPQKSTL FLQSHVPEHA QLSWVLNCYA QMGELNRMTQ FKDKSAKNEN 
NINVGLYSYP VLQAADILLY QADKVPVGED QKQHLELTRD IATRVNNLYG DVFKLPDPYI 
PDFGARIMSL QEPEKKMSKS DNNPNNFIGL LEEPKKLAKK IKRAVTDSDE QANIYFNPTE 
KPGVSNLLTL LSLSTGKSIK ALEPEYTDKM YGHLKGDVAD AVVALLEPIQ ARYAEIRADR 
AYLDDVMRQG AEKASARAAE TLAKVYNAVG FIPKP