| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00487 |
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| Symbol | |
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| ID | 6777529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 512593 |
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| End bp | 513732 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642753919 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002124799 |
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| Protein GI | 196155310 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGCTG CGGCGTCGCT TGCTAAAAGT GGCAAGCTAA TACTCGTTAT TTCTATTGTC
GTGTTTATTG CAGCTCTGGT TGTACTTCTT ATGACCGCAG GCTTAGGCAA CGCAACGCAA
GCCCCAGAAG CACGATTGCC TGTTGCCGTA TCCACAGGCA CCATCAAAAT ACAATCGGGT
TTCGAAACAC CAATTAATGT CTTTGGCCTG GTTGAATCGC CTAAAGCTGC ATCCCTGTCT
TTTGACGTGG CGGGTCAAGT CACCACACTA CTTGTTGAAG AGGGAGATGT GGTTAGCCAA
GGCGACATCT TAGCGCGACA AGATTTACAG CGCCTCAATG CGAGAAAGCG CGAACTTCAG
GCCTCTCTTG AACGCGCTAA CGCCGACCTG GCACTTACTC AAGTTAACAG TGATAGAACG
ACATCACTGG TTGAGAGAAA ACTGGAGTCA GCGCAGCGTC TTGACGAGGT AAAAGCCAGC
CTGAATGTCG CAAAAGCGCA GGTTAGCGAA ATCAAGGCTA CGCTGAATTC CCTTAATGTT
GAAATGCGCA AAGCCACACT TATTTCTCCT TTTGACGGCG TAGTCAATCG CCGTTTTTTA
GATGAAGGCA GTGTCGTAAA CGCTGGAAGC CCTGTGTTTG GGCTCACTAG TATCGAGAAC
TATCAAGCGC GGTTTGCTGT TCCAGCCGAC GTTATTGATC AGTTTGAGGT GAATGAGCCC
GTTCTTGTAA AAGTCGGTGA CATAAACGTA GCAGGTACTG TCACGCAGCG TCTTCCCATT
CGCAACGTGC AAACCAGAAC TGTTGATATT CTTGTCACAT TGAACAGTAA CGAGCGAGTT
CGACCGGGCG ATATGGCTAT TTTATCTGGC TTTCGTTCTC ATACAGAGAC CGGAGCTTGG
TTGCCAGTTA ATGCGTTAAG TAACGGGCTA CGCGGGTTGT GGCGTGTGTT TGTATTATCA
AATGAGAAAA ATACCACCCT AGAAGCGCGT ATTGTTGAAG TGGTGTATAC CGACGGCAAT
AATGCGTTTG TTCGCGGTGC GCTCAAAGAC GGCGAAATTT ATGTCAATGA AGGCACTCAT
AAGCTGGCTC CCGGGCAAAT GGTGTCTATT CCAAGCCAGC ATAAAGCTGG GGCGCGCTAA
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| Protein sequence | MSAAASLAKS GKLILVISIV VFIAALVVLL MTAGLGNATQ APEARLPVAV STGTIKIQSG
FETPINVFGL VESPKAASLS FDVAGQVTTL LVEEGDVVSQ GDILARQDLQ RLNARKRELQ
ASLERANADL ALTQVNSDRT TSLVERKLES AQRLDEVKAS LNVAKAQVSE IKATLNSLNV
EMRKATLISP FDGVVNRRFL DEGSVVNAGS PVFGLTSIEN YQARFAVPAD VIDQFEVNEP
VLVKVGDINV AGTVTQRLPI RNVQTRTVDI LVTLNSNERV RPGDMAILSG FRSHTETGAW
LPVNALSNGL RGLWRVFVLS NEKNTTLEAR IVEVVYTDGN NAFVRGALKD GEIYVNEGTH
KLAPGQMVSI PSQHKAGAR
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