| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00479 |
|---|
| Symbol | |
|---|
| ID | 6777640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 503418 |
|---|
| End bp | 503756 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642753911 |
|---|
| Product | nitrogen regulatory protein P-II |
|---|
| Protein accession | YP_002124791 |
|---|
| Protein GI | 196155302 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0347] Nitrogen regulatory protein PII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTAG TCACAGCGAT CATCAAGCCG TTCAAGCTAG ATGATGTTCG TGAAGCCATT
TCAGAAATCG GTATCGACGG CTTGACCGTG ACCGAAGTGA AAGGCTTTGG ACGTCAAAAA
GGACACACTG AGCTTTACCG CGGAGCGGAA TATCAGGTGG ATTTTCTACC TAAAGTCAAA
CTGGAAATTG CTGTTCAGGA TGATCAAGTA GAGCGCCTGG TAGAAGCCAT CGTTGGCGCT
GCCAAAACAG GCAAAATTGG AGACGGCAAG GTGTTTGTTT ATGACCTTGA ACACGCCGTT
CGTATTCGAA CTGGTGAGTC GGATAGCGAC GCGCTGTAA
|
|---|
| Protein sequence | MKLVTAIIKP FKLDDVREAI SEIGIDGLTV TEVKGFGRQK GHTELYRGAE YQVDFLPKVK
LEIAVQDDQV ERLVEAIVGA AKTGKIGDGK VFVYDLEHAV RIRTGESDSD AL
|
|---|
| |