| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00476 |
|---|
| Symbol | |
|---|
| ID | 6777658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 500248 |
|---|
| End bp | 501177 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642753908 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002124788 |
|---|
| Protein GI | 196155299 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2354] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCAG CTAACTTACT TGCCCTACTT GATGATATAG CAACATTGAT GGACGACATT
GCAACCATGT CGAAAGTCGC TGCGCAAAAA ACAGCGGGGG TTTTGGGTGA CGATTTAGCG
GTGAACGCCG ATCAAGTCCA AGGCGTTAAA GCAGAAAGAG AATTGCCTGT TGTGTGGGCC
GTAGCAAAGG GCTCGCTTAT CAATAAAGCT ATATTGGTTC CTGCTGCGTT AGCGATAAGT
GCTTTTGTCC CCTCACTTAT CACTGTATTG CTCGTACTCG GCGGGCTATA TTTATGTTTC
GAAGGTGCTG AAAAACTTCT GCACAAATAC CTGCCCCATG ATGATGAAGA AATAACACGA
GAAGCCAGAA TAGACGCATT GACCCATGAA AATGTCGACA TGGTCGCGTT TGAAAAAGAC
AAAATTAAAG GCGCCATTCG CACCGACTTT ATTCTGTCGG CTGAAATTAT CGTTATTGCA
CTTGGCACCG TGTCTGACGC CACACTGACA ACACAAATTG GCGTGTTAGT GGCGTTAAGT
TTAGCCATTA CGTTAGGGGT TTATGGCCTG GTTGCAGCAT TGGTCAAGAT GGACGACGTT
GGCCTTTACA TGCTTCGTAA GTCGCTAACA GGTTCGATGA ACACACTTCA ACGGTTTGTT
GGCAGAGCGC TTTTGGTTAC TGCTCCTGCA CTTATGAAAA CGCTGGCTGT TGTGGGCACG
GTTGCCATGT TTTTAGTTGG TGGAGGTATT CTTACCCATA GTATTGGCTT TTTGCACGTA
ATTACAGACT GGTTCGCAGG GGTTATTCCA GACGCCACAC TCGTCATGTC TATACTCGCC
GATGGCGCAG TGGGTGTTGT TGCAGGTGTC ATTATTGCTT TGGTTGTAAG TGCAGCGTCA
AAATTGAAGC GCAAAAGCAC GCGTTCTTAA
|
|---|
| Protein sequence | MAAANLLALL DDIATLMDDI ATMSKVAAQK TAGVLGDDLA VNADQVQGVK AERELPVVWA
VAKGSLINKA ILVPAALAIS AFVPSLITVL LVLGGLYLCF EGAEKLLHKY LPHDDEEITR
EARIDALTHE NVDMVAFEKD KIKGAIRTDF ILSAEIIVIA LGTVSDATLT TQIGVLVALS
LAITLGVYGL VAALVKMDDV GLYMLRKSLT GSMNTLQRFV GRALLVTAPA LMKTLAVVGT
VAMFLVGGGI LTHSIGFLHV ITDWFAGVIP DATLVMSILA DGAVGVVAGV IIALVVSAAS
KLKRKSTRS
|
|---|
| |