| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00454 |
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| Symbol | rpsQ |
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| ID | 6777827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 475113 |
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| End bp | 475370 |
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| Gene Length | 258 bp |
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| Protein Length | 85 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642753886 |
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| Product | 30S ribosomal protein S17 |
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| Protein accession | YP_002124766 |
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| Protein GI | 196155277 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.301377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGAGC AAAAAATTCG TACAGTACAA GGTCGTGTGG TTAGCAACAA GATGGATAAA
ACCATCACTG TTGTAGTTGA ACGTTTTGTT AAGCACCCAA TCTACGGGAA GTTCATCAAG
CGCTCTACTA AGCTTCACGC CCACGACGAA AACAACGTGT GCAACCAAGG TGACGTAGTA
ACAGTACGTG AATGTCGCCC GCTATCTAAG AACAAATCTT GGATGCTAGT TGACGTTGTT
GAGAAAGCTG GCGTTTAA
|
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| Protein sequence | MTEQKIRTVQ GRVVSNKMDK TITVVVERFV KHPIYGKFIK RSTKLHAHDE NNVCNQGDVV
TVRECRPLSK NKSWMLVDVV EKAGV
|
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