| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00421 |
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| Symbol | |
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| ID | 6778194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 435631 |
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| End bp | 436356 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642753850 |
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| Product | Cryptic haloacid dehalogenase 1 |
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| Protein accession | YP_002124733 |
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| Protein GI | 196155244 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTTAG GCAAAGCGCT ACGTTTATCA CCAATAGCAA AAGGAAGGTG TATCGTGACG
CCACGGGTAA TATTCTTCGA TATCAACGAA ACACTATTGG ATATGCAGGC CATTAAAACG
GGGCTCGCAA CGGTTTTAGA GGGTGATGAA ACGCTGGTAG ACCTGTGGTT TGCTAACTTG
CTTCACCATA GTTTAGTCGA CACCATGTCT TCACAGTTTC ACGACTTCAT TGATGTGGGC
GGTGCAGCAC TTACGATGGT GGCCCACAGT AAAAACATTG CGCTAGATGA AAAAACGGCA
AAAGACACCA TTAAGCAATA CATTACGAAG CTGCCTGCGC ATGATGATGT CATCCCTACG
CTCAAAGCTC TCCACAGTGC CGGTATTGCT TTGGTAGCGC TATCTAATTC ATCTGAAACT
GGCTTAAATG CTCAACTAGA ATATGCCAAT ATTAAACACT ACTTTTCCCA CGTGTTGAGT
GTAGAGCGCG TACGAACCTA CAAGCCTCAC CCCGCGGTGT ATCACTGGGC TTGCCAACAA
GCCAATGTGA AAAATGAAGA GGCGATGATG GTTGCCGCGC ACGGATGGGA CGTAAGCGGG
GCTAAAGCAA CGGGAATGCG AACTACGTTT GTAGAACGGC CAGGGAAAAT GATGTACCCG
CTCGGTTTAA CTCCCGATCA CAGTATTGCA TCATTGAATG AGCTGGTTAG TTTAGTAACT
CGTTAA
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| Protein sequence | MHLGKALRLS PIAKGRCIVT PRVIFFDINE TLLDMQAIKT GLATVLEGDE TLVDLWFANL
LHHSLVDTMS SQFHDFIDVG GAALTMVAHS KNIALDEKTA KDTIKQYITK LPAHDDVIPT
LKALHSAGIA LVALSNSSET GLNAQLEYAN IKHYFSHVLS VERVRTYKPH PAVYHWACQQ
ANVKNEEAMM VAAHGWDVSG AKATGMRTTF VERPGKMMYP LGLTPDHSIA SLNELVSLVT
R
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