| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00405 |
|---|
| Symbol | |
|---|
| ID | 6778341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 421397 |
|---|
| End bp | 423211 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642753834 |
|---|
| Product | Multicopper oxidase |
|---|
| Protein accession | YP_002124717 |
|---|
| Protein GI | 196155228 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2132] Putative multicopper oxidases |
|---|
| TIGRFAM ID | [TIGR01480] copper-resistance protein, CopA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATT CTATCGACAA CGGTCGCAGA AGATTTGTGC TCGCTGCCCT GACCTCAAGC
GCTGCGGCTG CGTTAACCAA CGTTAGTCCT CTATGGGCAG CACCTGTTGG TCGCCATTTT
AAAGATCAAG TTTTGACAGG TGATATTAAA AATCTCAATG TGTCAAAAGC GCAATTGCCA
ATAGGCTCAA ATATGGGCTC ACCTATAACG ATCAATGGTC AAATGCCGGG CCCGTTGATT
AGATTGAAAG AAGGACAGAG AGCGCACCTC AATGTAACTA ACCACCTAAA CCAAGATACT
TCAATACACT GGCACGGGAT TATTTTACCA CCAGATATGG ATGGCGTTCC GGGAGTTTCC
TTTGCCGGAA TAAAACCTGG CGAAACATTT AAATATGCAT TCGATGTCGA GCAAAACGGC
ACCTACTGGT ACCACAGTCA TTCAGGCCTC CAGGAACAGT TGGGCCATTT AGGACCTCTT
GTGATCGACC CCGCAGATGG GGACATTGGG GCTGATAGGG AACATACAAT TATTTTAAGC
GATTGGACGT TTTCAGACCC CCATGACGTT ATGCGAAAAC TGAAGGTAGC GGAAGGTTAT
TACAATTATC AAAAGCGAAC TATTTTCGAC ACGTTAGAAG ACGTAAAGAA AAAAGGGCTT
GCCGATACAT GGGAAGAGCG TGCTATGTGG GGTGCAATGC GTATGAGCCC TCGCGATATA
GCTGACGTTA CAGGCAGTAC ATATACATAC TTAATGAATG GCCGGACACC ACAAGATAAT
TGGCAAGCCC TGTTTAAAGT AGGCGAGAAA ATCCGGTTGA GGATCATAAA TGGTTCTGCG
ATGACTTATT TCGACTTTCG CATCCCAGGG CTTGAAATGA CAGTTGTAGC TGCAGATGGT
CAGCCTGTTA AACCAGTAAA TGTGGATGAG TTTCGAATTG CAGTAGCGGA AACTTATGAC
GTAATCGTTC AGCCAAAAGA GCGAAAAGCT TATACCTTTT TTGCGGAAAG TTTTGATAGA
AGTGGATATG CGCGTGGCAC CCTAACCCCG TCAATTGGCC TTACTGCAGA GGTTCCCCCA
CAGCGAGTTA TCACAGAGCG TGGTATGGCG GCGATGGGGA TGGACATGTC TGGTATGAAA
GGCATGAATA TGGATAAGTC CAAGGTCGAC AGCTCGGGCA TGGCTGCTCC AAAAGGTGAA
ATGAAAGGAA TGGGGCAGCA TAGCGCCCAT ACAATGCATG GCACCCAAAT GGAAGGAGAA
ATGACCCCCT CCAAAAAGCT CCCAGTAGAA AGCATAGACA TTGTCCACAG CGAAGACGGG
CACGGCGCTG GTGCAGCGAT GATTGCTAAA AATCCAAGTT CTAGGTTGGA TGAACCTGGG
ATCGGTTTGG AAGACAGCCC ACATCGTGTC CTTGTTTATA CAGATTTAGT CGGTGAAAGT
CCTTGGCCTG ACGAAAGAGA GCCGGAACGT CAAATTGAGC TTCACTTAAC GGGCAATATG
GAAAGGTACA TGTGGTCGTT CGATGGCAAA AAGTTTAGTG AAGTAGACGG ATATGTACGT
TTCAATTATG GCGAGAGACT ACGTCTGATC TTGGTTAATG ACACTATGAT GGATCACCCT
ATTCATTTAC ATGGTATGTG GATGGAACTT GAAAACGGCC AATATCCAAG ACCTCGTAAA
CACACGATCA GCCTCAAGCC TGGAGAGAAG GTCTCGTTAC AAATCAGCGC AGATGCCCCC
GGTGAGTGGG CGTTTCATTG TCACCTGCTA TACCACATGG AAGCAGGTAT GTTTCGTGTT
GTACAGGTCG CATAG
|
|---|
| Protein sequence | MKNSIDNGRR RFVLAALTSS AAAALTNVSP LWAAPVGRHF KDQVLTGDIK NLNVSKAQLP
IGSNMGSPIT INGQMPGPLI RLKEGQRAHL NVTNHLNQDT SIHWHGIILP PDMDGVPGVS
FAGIKPGETF KYAFDVEQNG TYWYHSHSGL QEQLGHLGPL VIDPADGDIG ADREHTIILS
DWTFSDPHDV MRKLKVAEGY YNYQKRTIFD TLEDVKKKGL ADTWEERAMW GAMRMSPRDI
ADVTGSTYTY LMNGRTPQDN WQALFKVGEK IRLRIINGSA MTYFDFRIPG LEMTVVAADG
QPVKPVNVDE FRIAVAETYD VIVQPKERKA YTFFAESFDR SGYARGTLTP SIGLTAEVPP
QRVITERGMA AMGMDMSGMK GMNMDKSKVD SSGMAAPKGE MKGMGQHSAH TMHGTQMEGE
MTPSKKLPVE SIDIVHSEDG HGAGAAMIAK NPSSRLDEPG IGLEDSPHRV LVYTDLVGES
PWPDEREPER QIELHLTGNM ERYMWSFDGK KFSEVDGYVR FNYGERLRLI LVNDTMMDHP
IHLHGMWMEL ENGQYPRPRK HTISLKPGEK VSLQISADAP GEWAFHCHLL YHMEAGMFRV
VQVA
|
|---|
| |