| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00398 |
|---|
| Symbol | |
|---|
| ID | 6778381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 416985 |
|---|
| End bp | 417617 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 642753827 |
|---|
| Product | predicted protein-S-isoprenylcysteine methyltransferase |
|---|
| Protein accession | YP_002124710 |
|---|
| Protein GI | 196155221 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2020] Putative protein-S-isoprenylcysteine methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGATAC TGAACTCAGC TATTTTTATC TTTTTTGCAT TCAGTTTTGT AAAGCCAAAA
TCTTCCACCG ACTGGCGAAG TTTGGGGGTA TTTTCTGCGT TTATTGTAGC CCTGTTTACC
GAAATGTATG GCTTCCCACT GACTATTTAT TTCTTGTCAG GATGGCTTGC TGAAACCTAT
CCGGAAGTAA ACTTTTTTGC GCACGAAAAC GGACATCTGT TGCATACTTT CTTTGGTTTT
AAAGGCGACG CCCACTGGGA CCCATTTCAT ATCGCCAGTA TGGTATTTAT TGTTGCAGGA
TTCTTTATCT TGTCCTCAGC ATGGAATGTG CTGCACCACG CTCAGAAGAA CCATCACTTA
GCTAAGACTG GATGGTATGC GCGGTGTCGC CACCCTCAAT ATTTAGCCTT CATACTGATC
ATGTTCGGTT TTTTGTTGCA ATGGCCGACC ATTCCCACAC TGGTCATGTT TCCAGTTTTA
GTTGTTGTGT ATGTGAAACT GGCAAAGCGT GAAGAAGCTC TGGCTATTGC TGAATTTGGC
GATGAGTATG TGAGCTATAT CAACACGACA CCTGGCTGGA TCCCAAACCT CAACTTTAAA
TTAAAAGGTG AAAGCCATGA AAAAATTCAC TAA
|
|---|
| Protein sequence | MVILNSAIFI FFAFSFVKPK SSTDWRSLGV FSAFIVALFT EMYGFPLTIY FLSGWLAETY
PEVNFFAHEN GHLLHTFFGF KGDAHWDPFH IASMVFIVAG FFILSSAWNV LHHAQKNHHL
AKTGWYARCR HPQYLAFILI MFGFLLQWPT IPTLVMFPVL VVVYVKLAKR EEALAIAEFG
DEYVSYINTT PGWIPNLNFK LKGESHEKIH
|
|---|
| |