Gene MADE_00395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00395 
Symbol 
ID6778293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp414004 
End bp416247 
Gene Length2244 bp 
Protein Length747 aa 
Translation table11 
GC content47% 
IMG OID642753824 
ProductCation transport ATPase 
Protein accessionYP_002124707 
Protein GI196155218 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCAG AAGTAACACA GCGACAATTA GTGATAGAAG GCGCCGGATG TGCCAGTTGC 
GTTGGAAAAA TAGAAGCTGC CTTGAAGCAG ACGCCGGGAG TGCAGAATGC CGAAATGAAC
TTTGCAGACA GAACAGTACT TGTATCGGGT ACAGCGGATT CTCAATTATT GGTTCAAGCA
GTAGAGTCCG TTGGTTACAA CGCAAAGCCT TTCGAAGATA AGCCTGACAC TGATGTAGTC
GATGAAAAAG AAGCAGCGGA TAGGACCTAT TACAAAAAGC TGATGCGAGA TACTTTCATT
GCGCTTTCGC TAGGTATCCC TCTAATGACT TATAGCATTG TTGTCGACGA AATGACGGTC
GAGACTAATG TCGAGAGGTT GTTGTGGCTA GCAGTTGGCC TACTGACGCT GGGTGTAATG
TTCTTTTCCG GCCGGCATTT TTACATCGGT GCGTGGAAGA GCTTTAAAAA TCATTCTGCC
AATATGGATA CACTCATTGC ACTTGGTACA GGCACAGCAT GGTTCTATTC GATGTTGGTA
GTGTTGGTAC CTGAAGCAGT GCCGTTAATG GCAAGGCACG TTTATTTTGA AGCTACAGCT
ATGATCATTG GTCTAATTGA TCTGGGGCTT GCCTTAGAAC TAAAAGCCCG CGGAAAAACC
TCAGAAGCAA TCAAACGTTT AATTGGATTA CAAGCGAAAA CAGCCACGGT TATTCGCGAC
AATAAAGAGG TCCAGGTCGC TATCGAGCAA GTGCTTTTTA ACGATGTCAT CAAAGTCAGG
CCTGGAGAAA AAGTGCCTGT TGATGGTGTG GTTGTTGAAG GCCATACGTC AATCGACGAG
TCAATGCTAA CCGGGGAACC GATGCCAGTT GAAAAATCAC ATGACGATGA AGTCGTTGCT
GGAACTCTCA ACAAGTCAGG AATGTTTCTA TTTAAAGCAA CTCGAGTAGG TAAAGACACG
GCACTGGCGC AAATCATTGC AATGGTTAAA CGCGCACAAA ATTCAAAGCC GCCTATTGGG
CGCTTGGCCG ACGTGATATC CGCTTACTTT GTTCCTGTGG TCATGATTAT ATCTGTGCTC
AGTGCGCTAG CATGGCTGAA CTTTGGGCCT GAGCCCGCAC TGGCATTTGC CATAGTTTCG
GCCACCACTG TATTGATCAT TGCTTGTCCA TGTGCATTGG GCCTAGCCAC GCCGATGTCA
GTTATGGTGG GGGTTGGAAA GGCTGCTGAA GCCGGCGTGC TAATTCGCAA CGGCGAAGCG
CTACAAACGG CATCAAAAAT CAGTGTGATG ATACTGGATA AAACCGGAAC GATTACGGAA
GGTACACCCA AGGTCACTGA CATAATTTTA GCCAATTTCA GTGATGAAAA GACAGTGCTG
CAATTGGCAG CTAGTCTGGA AAATGGTTCA GAGCACCCAT TAGCAATGGC GATAGTAGAA
AGTGCCCACG ACCAGGGCAT TGAGCTGCTG AAAACCGAAG AGTTTAATGC GATTACCGGT
ATGGGGGTTG AAGGCCGTTG TGAAGGAAAG GCCTTATTGT TTGGTAACAG CAAGCTTATG
GCTTCAAAAG GGGTGGGCAT AGGTAATTAT TCAGAGAAAG CACAAACACT GGCCAAAGAC
GCCAAAACTC CCATGTATTT CGCTGTAGAT GGACAACTTG CTGCCATCAT AGCGGTTGCC
GACCCGATAA AACCTGACTC TGTTTCTGCC ATCAAGCGTC TTCAGGCTAA TGATATCCGG
GTCATCATGT TAACGGGGGA CAACAAAGAA ACTGCTGCTG CAGTGGCAAA GAAAGCGGCA
ATAAGCGAGT TTTTTGCTGA AGTATTGCCC GAAGATAAGG CCAACAAAGT ACATGAATTA
CAGCAGCAGA GAGAAGTAGT GGGTATGACT GGTGATGGAA TTAACGATGC TCCGGCTCTT
GCCTTGGCTG ATGTTGGCTT TGCCATTGGT ACAGGAACGG ACGTTGCCAT TGAAAGCGCC
GATATCACCC TGATGCGCGG CTCGTTGCAT GGTCTGGCCG ATGCTATAGC GGTTAGTAAA
GCCACCTTGC GCAACATTAA GCAAAACTTG TTTGGAGCCT TTATCTACAA CGTAGCAGGT
ATACCTTTTG CGGCGGGCGT GCTCTATCCA TTTTTCGGAG TATTGCTAAG CCCAGTTATC
GCCGGAGCCG CCATGGCATT TTCTTCGTTA ACAGTGGTAT CAAATGCGAA CCGGCTTCGC
CTATTCAAGG CAAAGGACCA CTAA
 
Protein sequence
MSAEVTQRQL VIEGAGCASC VGKIEAALKQ TPGVQNAEMN FADRTVLVSG TADSQLLVQA 
VESVGYNAKP FEDKPDTDVV DEKEAADRTY YKKLMRDTFI ALSLGIPLMT YSIVVDEMTV
ETNVERLLWL AVGLLTLGVM FFSGRHFYIG AWKSFKNHSA NMDTLIALGT GTAWFYSMLV
VLVPEAVPLM ARHVYFEATA MIIGLIDLGL ALELKARGKT SEAIKRLIGL QAKTATVIRD
NKEVQVAIEQ VLFNDVIKVR PGEKVPVDGV VVEGHTSIDE SMLTGEPMPV EKSHDDEVVA
GTLNKSGMFL FKATRVGKDT ALAQIIAMVK RAQNSKPPIG RLADVISAYF VPVVMIISVL
SALAWLNFGP EPALAFAIVS ATTVLIIACP CALGLATPMS VMVGVGKAAE AGVLIRNGEA
LQTASKISVM ILDKTGTITE GTPKVTDIIL ANFSDEKTVL QLAASLENGS EHPLAMAIVE
SAHDQGIELL KTEEFNAITG MGVEGRCEGK ALLFGNSKLM ASKGVGIGNY SEKAQTLAKD
AKTPMYFAVD GQLAAIIAVA DPIKPDSVSA IKRLQANDIR VIMLTGDNKE TAAAVAKKAA
ISEFFAEVLP EDKANKVHEL QQQREVVGMT GDGINDAPAL ALADVGFAIG TGTDVAIESA
DITLMRGSLH GLADAIAVSK ATLRNIKQNL FGAFIYNVAG IPFAAGVLYP FFGVLLSPVI
AGAAMAFSSL TVVSNANRLR LFKAKDH