Gene MADE_00394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00394 
Symbol 
ID6778295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp413494 
End bp413928 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content41% 
IMG OID642753823 
Productputative Zn(II)-responsive transcriptional regulator, regulates Zn export (MerR family) protein 
Protein accessionYP_002124706 
Protein GI196155217 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAA GAGAGATCGC AAGCGCCTTG GCTACAACGC CAGATACTGT TCGCTATTAC 
ACGCGCTTGC AGTTAATAAC GCCGGCAAAA TCTGACAATG GTTATAAATT CTATTCAACG 
AAAGATGCTT CCAGGTTGCG GTTTATATTA AGTGCAAGGC ATTTAGGTTT TTCAGTTGAA 
GATATCAAGC AAATTCTCAG AGAAGCAGAT AATGGAAAGA CCGCTTGTCC CCTAGTTAGA 
ACCTTAATTG CAAGAAGGCT AGCAGAAACA GAAAGACAAT TTAAGGCAAT GTTGTTACTC 
AGGCAAAATA TGATGCTGGC AGTAAGGAAA TGGGGAGCAA TGGGTGACAA AGCCCCATCC 
TCACACGTGG TCTGTCATTT AATAGAAGAG TTTGAACACA CCGTCCTGGA GGAAAACATA 
AATGACAGAA CTTAA
 
Protein sequence
MKVREIASAL ATTPDTVRYY TRLQLITPAK SDNGYKFYST KDASRLRFIL SARHLGFSVE 
DIKQILREAD NGKTACPLVR TLIARRLAET ERQFKAMLLL RQNMMLAVRK WGAMGDKAPS 
SHVVCHLIEE FEHTVLEENI NDRT