| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00362 |
|---|
| Symbol | |
|---|
| ID | 6779141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 382033 |
|---|
| End bp | 383610 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642753791 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_002124674 |
|---|
| Protein GI | 196155185 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAC GCTCTATTAG TCACCTTTCA CCGTCTGAAA TTGAGGCTGC CTTTGCTCAT
CAAGCCGATG AAATTGCGCA ACTCAAGCAG CAACTCGACT GGCTTAAACG TCAGTTGTTC
GGGCGTAAGT CTGAAAAGGT GTTAGCGGAT AATCCGGCGC AGAGCAGTTT GTTTGATGAG
GGGGAAACCC TCACCTTACC GGCAGAAACA AAACCGGTGA AGGCACATAC TCGTTCCTCA
CAAAAGCAAC GTCGCGACTC GGATTTGAAT GATGAAGGCC TGCGTTTTGA TGAGACAGTG
CCGCAACAGA TTATTGATAT ACCTGCGCCA GAATTACAGG GGGCGGATGC CGACCAGTAT
GAATTAGTGG ATACCAAAGA AACCTGTCGC TTAGCACAAC AGCCTGGCAG TTATGTGGTA
TTGAGATTCC GTCGACAGGT CGTGCGTCAT AAAACCACGC AAACCATTAA GGATACCCCA
GCGCCAGGCA ATGTGCTGGA AGGCTGTTAC TGCGATGTCT CACTGCTCGC CGGACTGATG
GTTGATAAAG CGGTGTATCA CTTACCGCTT CACCGCCAAC ATCAACGGAT GCTGGATAGC
GGTATTACCC TTAGCCGGGC CACCTTAATC AACTGGATAC AAAAAGGCAT TGAGCTGCTT
CGACCCATCG CCAAAGCCCA GTGGCAACAC ATTCTGCAAA GTAAAATACT GGCCATGGAT
GAAGTGCCCA TTAAAGCAGG TCGCACTAAA GGCGCTGGCC GAAAACTCGG ACACATGAAA
CAAACCTACT TCTGGCCCCT GTACGGTGAC AGTGATGAAG TGGCGTTTAC CTGGAGTAAC
AGCCGGGGTA TGTTGCATGC CCAAGCACAG TTACAGGACT TTACCGGCAC CTTGCTCACC
GATGGTTATG CCGCCTACAC CAAAACGGTT GAACAATTAA ATCAATACGA ACAACAGATT
GTGCATGCAG CCTGTTGGGT ACACATGCGC AGGGGCTTTG AAAAAGCCCT CGACAGTGAG
CCGCACACCG CGCAGCAGGC ACTGGATATC ATCGCCACGC TTTACCGGCA TGAAAAACAC
ATCAGGCATA AACAATTAGA CCTGGCCGAT ATCCATGCTT ACCGGCAACA ACACAGCGAA
CCCTTAGTCA CTGACTTCTT CCGGTGGGTT TATCAACAAC GACAGCGCAC TGATTTACTC
CCCAAGTCTC CCTTCGCCAA GGCACTCCAT TATGCGCATG AACGAGAAAG CCAACTCAAG
GTGTTCCTGA GCAATCCAGC TCTACCCATG GATACCAATC ATCTTGAGCG GGCACTGCGT
GTTATTCCCA TGGGGAGAAA AAACTATTTG TTCTGCTGGT CTGAACTTGG CGCTGAACAG
CTGGGCATAC TGCAAAGCCT GATGGTGACT TGCCGCCTGC AAGGCGTTAA TCCCTACCAT
TATCTGGTGG ATGTATTACA ACGCGTGGCA TTACATCCGG CCAGGGACGT AATCGACCTC
ACGCCGCGGC TCTGGAAACA AAAATACAAT CAAAACAGGT TAGTCAGCGA TGTCAAAATA
CTCACTTCCC AACACTAA
|
|---|
| Protein sequence | MKTRSISHLS PSEIEAAFAH QADEIAQLKQ QLDWLKRQLF GRKSEKVLAD NPAQSSLFDE
GETLTLPAET KPVKAHTRSS QKQRRDSDLN DEGLRFDETV PQQIIDIPAP ELQGADADQY
ELVDTKETCR LAQQPGSYVV LRFRRQVVRH KTTQTIKDTP APGNVLEGCY CDVSLLAGLM
VDKAVYHLPL HRQHQRMLDS GITLSRATLI NWIQKGIELL RPIAKAQWQH ILQSKILAMD
EVPIKAGRTK GAGRKLGHMK QTYFWPLYGD SDEVAFTWSN SRGMLHAQAQ LQDFTGTLLT
DGYAAYTKTV EQLNQYEQQI VHAACWVHMR RGFEKALDSE PHTAQQALDI IATLYRHEKH
IRHKQLDLAD IHAYRQQHSE PLVTDFFRWV YQQRQRTDLL PKSPFAKALH YAHERESQLK
VFLSNPALPM DTNHLERALR VIPMGRKNYL FCWSELGAEQ LGILQSLMVT CRLQGVNPYH
YLVDVLQRVA LHPARDVIDL TPRLWKQKYN QNRLVSDVKI LTSQH
|
|---|
| |