| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00352 |
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| Symbol | |
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| ID | 6777962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 373640 |
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| End bp | 375946 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642753781 |
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| Product | Hydrogenase maturation protein HypF |
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| Protein accession | YP_002124664 |
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| Protein GI | 196155175 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACTG CCCGCACATA TGTTGCCAAT ACGAATAAGA GTAAAACTAT CGCCTATGAG
TTGAACATTA CTGGAGTCAT CCAGGGGGTT GGGTTCAGAC CGTTAGTTTA CTGCTTAGCG
TATGAAAAAA GTATTGTTGG TTGGGTACAA AACGACTGTG GATGTGTGCG AATACACGCT
GAAGGCACTG AGCTAGACGT TGAACAATTT GTATTCGACT TACTGAACAA TGGGTCGCTA
GTTTCCATAT CCTTGCTGGA AAAAAAGCAG GTTAAACTGA GTAATGTAGA CTCGTTCACG
ATAAAAGAAA GCGGTCATGA TATAGCGTGC GGGGCGATAT CAATCCCCAA AGATGTCTAT
TTGTGTGGAG CGTGTAAAGC TGAGTTACTG TCAAATACTA ACCGACGTGG CACCTATAGC
TTTATCGCTT GCAGTAAATG TGGTCCACGA TTTTCTATGC TGCGAGCAAT GCCATACGAC
AGAAAGAACA TGAGTATGTC AGCATTTCCA ATGTGTGAGT TATGTCGTAA AGAATATCAA
TCGCCAACTG ATAGGCGCTT TCATGCTCAA CCAATAAGCT GTCGCGTATG CGGGCCTGAA
GTATTTTGTT CAACTGTCGG CGGGCGCGTG GTCTCGCAAG GCGATGTTGA TGTTGTAGCA
ACGGTTGTCG CGTATTTGAA TCAAGGCAAA ATTGTCGCGT TAAAAAGTAT AGGCGGTTAT
CACTTGCTCT GTGACGCACA AAGCACTGAA GCGGTAGACC TTTTACGCCA GCGTAAAAAT
AGACCAGATA AACCTTTCGC GGTCATGCTC CCAGAGCCTC GTGCAGACGA AACAAGTGAG
GATTGGTTAG ATAAATGCGT TGCTGTAGAC AGTCATCAAA GAGCGCTCTT ACTAAGCCCC
GTGCGACCCA TTTTACTTGC AAAAAAGCAA TCGAATGTAC CCATTGCAGA TAACGTAGCG
CCCATGCTTC GTGATTTGGG GGTGATGTTG CCGTGCAGCG GACTGCATTT ACTCATTATG
CAGCAATTCA ATCGCCCCAT GGTGGCTACG TCAGGAAATA TTTACGGTGA ACCGATGGTC
ACATCGACGT CATCGGCACA GCAACACCTT TCGATGTTGG CAGACATCTT CGTGCACCAT
AATCGAGACA TTTTTCACAA ACTGGATGAT TCTGTGCTGC GAACGCTTAA GTCAGGCACC
ATTCCAATTC GCCTGGGGCG GGGTATAAGT CCGATAGAAT TATCATTGCC ATATACTGTG
CAGGAACCAA TGCTTGCTGT TGGCGCGAAT CAGAAAAATA CAGTCGCAAT AGCTTTGAAC
AATCGACTTA TCGTAACACC GCATATTGGC GACCTCGATT CTCCGATAAT GCAAGCGCAC
TTTGAAAAAT GTATCAGTGA CTTTCAAGCT CTCTATCATG TTCATCCACA GCGTATTCTT
TGCGATAGCC ATCCTGGCTA TATCAGTTCC CGTTGGGCCA AAGGCAGTGA ACTACCGACT
ACTAAAGTTT TACATCACCA CGCTCATGCA TCAGCGTGGG CATTAGCTGC TGAAATATCG
ACACCAAGCT TGGTTTTCGT GTGGGATGGA ACGGGATTAG GCGAGAATGG CGAGATGTGG
GGAGGGGAAG TTTTTTGTGG GACGCCGGGC AATTGGAAAC GTGTTGCCTC ATTAGCGCCT
ATGAAGTTGC AAGGCGGCAA CAAGGTTCCA AATCAACCAT GGCGAAGTGC AGCATCACTA
GTGTGGGGTA CTAATTTCAC CGGCATTGAT TTTAAACCAT TTGATCCACA ACAATTAAGC
TACAACGCAT GGCAAAACGA ACTCAATTGT CATGTTAGTA GTTCAATGGG AAGACTGTTC
GACGCGGCGG CATTTGCCTG CTGTGAACAG AGCGAAGTCT CTTATGAAGG GCAGGCGCCG
ATGATGTTGG AAAGCGTTGC GTCGACGCCC TCTAAGGTTA TGCCGTTAAC GTTGGTCCAG
AAAAACGACG AATTTATTCA AATGGATTGG CGAACACTGG TACCGGAACT ATTTGATTTC
AAAGTGTCTC CTCAAACTCG TGCTGCAAAT TTCCACGCTT CGTTAATTGA AACGGTATGG
GAGGTAACCC TACATTGCCG TAAAAAGTTT AATTTTGACC ACATTGGATT GGCAGGAGGC
GTCTTCCAAA ATCGCATTTT GTGTGACGGT ATATCACAAC GGTTTTTACA ATCAGACATT
CCTGTGGTTA TTCCAAGTAG TTTGCCATTA AACGATGCCG CAATAAGTGT TGGGCAAATC
CACGAATACT GTTCACGGAG GTCATAA
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| Protein sequence | MTTARTYVAN TNKSKTIAYE LNITGVIQGV GFRPLVYCLA YEKSIVGWVQ NDCGCVRIHA
EGTELDVEQF VFDLLNNGSL VSISLLEKKQ VKLSNVDSFT IKESGHDIAC GAISIPKDVY
LCGACKAELL SNTNRRGTYS FIACSKCGPR FSMLRAMPYD RKNMSMSAFP MCELCRKEYQ
SPTDRRFHAQ PISCRVCGPE VFCSTVGGRV VSQGDVDVVA TVVAYLNQGK IVALKSIGGY
HLLCDAQSTE AVDLLRQRKN RPDKPFAVML PEPRADETSE DWLDKCVAVD SHQRALLLSP
VRPILLAKKQ SNVPIADNVA PMLRDLGVML PCSGLHLLIM QQFNRPMVAT SGNIYGEPMV
TSTSSAQQHL SMLADIFVHH NRDIFHKLDD SVLRTLKSGT IPIRLGRGIS PIELSLPYTV
QEPMLAVGAN QKNTVAIALN NRLIVTPHIG DLDSPIMQAH FEKCISDFQA LYHVHPQRIL
CDSHPGYISS RWAKGSELPT TKVLHHHAHA SAWALAAEIS TPSLVFVWDG TGLGENGEMW
GGEVFCGTPG NWKRVASLAP MKLQGGNKVP NQPWRSAASL VWGTNFTGID FKPFDPQQLS
YNAWQNELNC HVSSSMGRLF DAAAFACCEQ SEVSYEGQAP MMLESVASTP SKVMPLTLVQ
KNDEFIQMDW RTLVPELFDF KVSPQTRAAN FHASLIETVW EVTLHCRKKF NFDHIGLAGG
VFQNRILCDG ISQRFLQSDI PVVIPSSLPL NDAAISVGQI HEYCSRRS
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