Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00347 |
Symbol | |
ID | 6777307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 369047 |
End bp | 370924 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642753776 |
Product | Ni-Fe hydrogenase large chain |
Protein accession | YP_002124659 |
Protein GI | 196155170 |
COG category | [C] Energy production and conversion |
COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATA CAGCAAGTAA CAACCGGTTA GTCGTCGATC CTATCACTCG AATTGAAGGG CATCTTCGAA TAGAAGCTGA AATGGATGGG AATACCATCA AACAGGCGTT CTCATCAGGC ACGTCTGTTC GGGGAATTGA ACTGATTTTA CAAGGCAGAG ATCCGCGTGA CGCTTGGGCT TTTGCGCAAC GTATCTGTGG CGTCTGCACG CTGGTGCATG GTATGGCATC GGTGCGTGCT GTCGAAGATG CAATTAGAAA AGCTTGGCGG TCAAACGCAA AATTAGGGGT TGCCATTGGA AAGCCCTCCA TGACATCTAT GCCAAAAGGA CCGATGCAAC ATGGTAAAAA AGGGCACCGA CAGTCACGTA CTTCAATAGG CGTACTGAGT GAAGCAGAAA TGGCTATCCC TCAAAATGCA CAACTGATAA GAAACATCAT GATTGCAACC CAATATGTGC ATGATCACGT GATGCATTTT TATCACTTGC ATGCCCTAGA TTGGGTTGAC GTTGTTTCTG CACTAGATGC AGATCCAACG AGAACCGCTA CGCTCGCCGG TCAATTGAGT GATTATCCTC GTTCATCGCC GGGATATTTC AAAGATGTGA AGCAAAAAGT CAAAACGCTG GTTGAGTCTG GGCAGCTAGG GATATTCAGT AACGCGTATT GGGGGCATCC TGGCTATAAA CTGCCACCTG AAGTTAACTT GATGGCATTA GCACATTATT TAGATGCGCT AACGTGGCAG CGTGAAGTTG TAAAAGTTCA CACCATATTT GGAGGGAAAA ACCCTCATCC TAATTTTGTC GTTGGCGGCG TGCCTTCACC GATTAATCTC AATGCGTCAA CGGGTATTAA CACGAGTCGA TTAGTGCAAC TACAAGATGC TATCACGCAA ATGAAGAGCT TTGTCGATCA GGTGTATTAC CCCGATATTG TGGCGATTGC GGGTTATTAC AAAGAGTGGG GGACACGAGG GGAAGGGCTG GGTAACTTTC TTACCTATGG AGACTTACCT ATGACATCAA TGGATGACCC TGATTCTTTC TTGTTTCCAC GAGGTGCAAT ACTTGGTCGA GACTTGAGTA AAGTGCATGA CCTTGATCTA GATGATCCCT CTGAAATTCA AGAATTCGTC TCTTCCTCCT GGTATCGATA TAGTGGAGGG AACGCAAGTG GTTTACACCC TTTTAATGGA CAAACAACAC TCGAGTATAC TGGTCCGAAA CCGCCTTACA AGCACCTAAA TGTAGGGGCT GAATATTCAT GGTTGAAAAG TCCGCGTTGG AAAGGCCATG CGATGGAGGT GGGACCGCTG GCTCGCGTGC TAATGATGTA TGCTAAAAAA GATGCCGCTG CGCAAGACAT CGTTAATCGA TCTCTTTCTA TCTTGGATTT AGAGACCTCT GCACTTTTCT CCACACTCGG TAGGACGCTC GCCAGAGCAG TGGAAACAAA AATTGTGGTT AACCAGCTAC AGTCTTGGTA TGACCAACTA TTGGATAATA TCGCAAAGGG CGATACCGAT ACGTTTAACC CTCTGTATTT TGACCCTACC AATTGGCCAA TTAAAGGCCA GGGGGTAGGC GTGATGGAAG CGCCTCGTGG CGCGTTGGGG CATTGGTTGG TCATGCAAAA TGGCAAAATT GAGAATTACC AATGTGTCGT GCCTACGACA TGGAACGCTG GACCTCGAGA TCCCAACTCA CAGGCAGGTG CTTATGAAGC CGCTCTGCAA GATAAACATA CGCTACATGA TCCTGACCAA CCTTTAGAGA TTTTGCGAAC ACTTCATAGT TTTGACCCCT GCTTAGCATG TGCCGTGCAC GTAATGGACG AAACAGGGGA AGAGCGTTTG CGTCTAAAAG TTCGTTAA
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Protein sequence | MENTASNNRL VVDPITRIEG HLRIEAEMDG NTIKQAFSSG TSVRGIELIL QGRDPRDAWA FAQRICGVCT LVHGMASVRA VEDAIRKAWR SNAKLGVAIG KPSMTSMPKG PMQHGKKGHR QSRTSIGVLS EAEMAIPQNA QLIRNIMIAT QYVHDHVMHF YHLHALDWVD VVSALDADPT RTATLAGQLS DYPRSSPGYF KDVKQKVKTL VESGQLGIFS NAYWGHPGYK LPPEVNLMAL AHYLDALTWQ REVVKVHTIF GGKNPHPNFV VGGVPSPINL NASTGINTSR LVQLQDAITQ MKSFVDQVYY PDIVAIAGYY KEWGTRGEGL GNFLTYGDLP MTSMDDPDSF LFPRGAILGR DLSKVHDLDL DDPSEIQEFV SSSWYRYSGG NASGLHPFNG QTTLEYTGPK PPYKHLNVGA EYSWLKSPRW KGHAMEVGPL ARVLMMYAKK DAAAQDIVNR SLSILDLETS ALFSTLGRTL ARAVETKIVV NQLQSWYDQL LDNIAKGDTD TFNPLYFDPT NWPIKGQGVG VMEAPRGALG HWLVMQNGKI ENYQCVVPTT WNAGPRDPNS QAGAYEAALQ DKHTLHDPDQ PLEILRTLHS FDPCLACAVH VMDETGEERL RLKVR
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