| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00346 |
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| Symbol | |
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| ID | 6779158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 368007 |
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| End bp | 369029 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642753775 |
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| Product | Ni-Fe hydrogenase, small subunit |
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| Protein accession | YP_002124658 |
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| Protein GI | 196155169 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGGC TAAGGAGGAT TGAAATGGCG CTACCAACAT TAAACAAGCA GTTACAAGCG
TCCGGTATCT CAAGACGCAC ATTTCTTAAG TTTTGCGCTA CAACGGCGTC TTTACTGGCA
TTGCCGCAAA GCGCTGTTGC CGATTTGGCG ACTGCCCTTG GCAATGCGAG AAGACCCTCT
GTGATTTGGT TGCCCTTTCA AGAGTGCACA GGGTGTACCG AAGCAATATT GCGCTCTCAT
GCTCCCACAT TGGAAAGCCT TATTTTCGAT CATATTTCGT TGGATTATCA GCATACGATA
ATGGCTGCTG CGGGAGAGCA AGCTGAAGAC GCTAGGCGTG CGGCGATGAA CGCGCACAAA
GGGCAATATT TGTTGTTGGT TGATGGTTCG GTTCCGGTGG GTAACCCAGG ATACTCAACG
ATCAGTGGCA TGAGTAATGT CGATATGCTG AGAGAATCGG CAAAAGATGC TGCGGGTATT
ATTGCCATCG GTACCTGCGC GTCTTTTGGC GGGATCCCTA AAGCAAACCC AAATCCGACG
GGGGCAGTGG CAGTAAGCGA CATTATTACA GACAAGCCAA TCGTAAACAT TTCAGGCTGT
CCGCCACTGC CTATCGCGAT TACAGCTGTG TTGGTTCATT ACCTGACGTT TAAGCGTTTC
CCTGATCTCG ACGAATTACA ACGCCCACTC GCTTTTTTTG GTGAAAGCAT CCATGACAGA
TGTTATCGAC GCCCATTTTT TGAACAACGT AAATTTGCAA AATCGTTTGA TGATGAGGGG
GCAAAAAATG GGTGGTGTTT GTTCGAACTT GGTTGTAAAG GGCCCGAAAC CTTTAACGCA
TGTGCAACGG TTAAATGGAA TCAAGGCACG AGTTTTCCTA TCGAATCTGG CCATCCGTGT
CTTGGTTGCT CTGAGCCCGA TTTCTGGGAT AAAAGCAGCT TTTACCAAGC CTTGGGTCCA
TGGGAGTGGT ACAAATCCAA ACCCGGCAAA GGTGCACAGA AGCATGCTGG GAAAAACTCA
TAA
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| Protein sequence | MKRLRRIEMA LPTLNKQLQA SGISRRTFLK FCATTASLLA LPQSAVADLA TALGNARRPS
VIWLPFQECT GCTEAILRSH APTLESLIFD HISLDYQHTI MAAAGEQAED ARRAAMNAHK
GQYLLLVDGS VPVGNPGYST ISGMSNVDML RESAKDAAGI IAIGTCASFG GIPKANPNPT
GAVAVSDIIT DKPIVNISGC PPLPIAITAV LVHYLTFKRF PDLDELQRPL AFFGESIHDR
CYRRPFFEQR KFAKSFDDEG AKNGWCLFEL GCKGPETFNA CATVKWNQGT SFPIESGHPC
LGCSEPDFWD KSSFYQALGP WEWYKSKPGK GAQKHAGKNS
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