| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00319 |
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| Symbol | |
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| ID | 6775725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 347099 |
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| End bp | 349117 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642753748 |
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| Product | putative cation efflux system protein |
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| Protein accession | YP_002124631 |
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| Protein GI | 196155142 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAA TTAAAGCACT CGTCATAGGC GGGGTAGCAG GCGGTATTAT GACTGCGTTG
GCATTCACGT TTCTGATACC ATCTTCATCA TCCACCGCGA ATAATGAGCA AAACGAAGAG
AAGCAACCGT TGTATTGGGT TGCGCCGATG GACCCAAATT ACCGCAGAGA CGAACCAGGA
AAGTCTCCGA TGGGCATGGA TCTCATTCCT GTCTACGAAG AAAGTTCAAG TGGTGATGCG
GGCCCAGGAA CAATTACTAT AGCGCCAAAT GTGGAGAACA ATCTTGGTGT TCGAACTGCG
AAAGTGCAGC GCCGCGCGCT GCATGTCCCT ATTAGAACTG TCGGGTACGT TCAATACAAC
GAAGAAACAT TAATCCATGT GCATCCTCGC GTTGAAGGCT GGATAGAAAC ACTGCATGTA
AAAGCATCTG GAGAATATGT TAAAAAAGGG GAACCACTTT ACTCTCTATA CTCGCCTGAG
TTAGTGAATG CACAAGAAGA ATTGCTGCTT GCTATGCGCA GAAACAACAA AGATCTGATC
GTAGCTGCTC GTTCTCGCTT AAATGCATTG CAAGTGCCTG AAGACGTCGT GGAGACGTTA
ACAAAAACAA AAAATGTTCA GCAAACCGTT ACCTTTTCCG CGCCCCAAAC CGGATTCGTA
GATAATTTAA ACATTCGAGA AGGTTTCTTT ATAAAACCTG GCGTTACAGT CATGTCGATT
GGTGCATTGG ATGAGGTTTG GGTTGATGCA GAGGTATTTG AGCGACAAAC CGCCCAAATA
GTGGAAGGGC TGCCTGTTAC TATGACATTA GATTTCCTCC CCGGAAAGAC GTGGCAAGGC
GTTGTAGACT ACGTCTACCC AACCCTTGAA CAGAGTACCC GCACACTGCG TGTGCGTCTT
CGCTTTGCTA ATCAAGATTA TACGTTAAAG CCGAACATGT TCGCTCAAGT GACTATCCAC
TCTGATATGG ATTCGACCAA CTTGATCGTG CCAACCGAAG CGGTTATTCG AACAGGCAAT
CAAAATCGCG TTGTATTGGC ATTGGGAGAT GGAAAATTTA AATCAGTTGC AATCAAAATT
GGGCGAGTGG TTGACGAGTT TACAGAAGTA CTTGAAGGAC TGATCGATGG TGACAGCATT
GTCACCTCCG CTCAATTTAT GCTTGATTCA GAGAGCAGTA TTAGCTCTGA CTTTAAGCGA
ATGGAACCCC CTGAAGAAAG TCCAACATCG GTCTTCACAG AGGTGATGAT CACAGACGTG
ATGCCTTCTC ACAACATGAT AACTGCAAAA CATGGTCCAA TTCCAGAATG GGATTGGCCG
CCGATGACCA TGGATTTTGT GGTAGCGGAG CATATCAATT TAGCAACGGT CAAAGGTGGT
TCATCGGCAC ATATCGAGAT CAGTAAGCAA ACTGATGGTC AATATGTGGT GACAACCGTG
CACATTATCG ATTCAGCACA AAGTACACAG GCGACTATGT CTGAAAGCGT TTGGACTGAA
GTCAAGATTA ATTCTGTAAT GGATGGGCAT CGAATGATAA ATGTCGATCA TCCCGCTATA
AAAGAGTGGG ATTGGCCCGC GATGACGATG GATTTTAACG TGGCAGATAA CATTACCTTG
TCTGATTTGG CCTCTGGAAC GCTTGCGCAT ATTGAAATTT CAAAATCCTC AAGTGGCGAA
TATCTTGTTT CTACCATTCA TGTTGTTGAA GAGGCAAGTA GTGAAACAAG TACCGCTGTC
GACGCTGTGT GGACTCAAGC AACGGTCAAT GCAGTGATGA GTGCTAGCAA CCAGTTAAGC
CTTGAACATG ACCCTATTGA GGCGTGGGAT TGGCCTGCAA TGACAATGGA TTTTAACGTC
GCTAATGAGG TTGATTTATC TGACATTACC GCTGGTATGC GACTGCACAT CGAAATTACC
AAAACCCAAG ACGGTGCGTA CGTTATTACC ACAGTACATA TACAAGCATC TGATAAAGGA
ACGATGGATC ACAGCCAACA TGAAGGAGCG CACGAATGA
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| Protein sequence | MSTIKALVIG GVAGGIMTAL AFTFLIPSSS STANNEQNEE KQPLYWVAPM DPNYRRDEPG
KSPMGMDLIP VYEESSSGDA GPGTITIAPN VENNLGVRTA KVQRRALHVP IRTVGYVQYN
EETLIHVHPR VEGWIETLHV KASGEYVKKG EPLYSLYSPE LVNAQEELLL AMRRNNKDLI
VAARSRLNAL QVPEDVVETL TKTKNVQQTV TFSAPQTGFV DNLNIREGFF IKPGVTVMSI
GALDEVWVDA EVFERQTAQI VEGLPVTMTL DFLPGKTWQG VVDYVYPTLE QSTRTLRVRL
RFANQDYTLK PNMFAQVTIH SDMDSTNLIV PTEAVIRTGN QNRVVLALGD GKFKSVAIKI
GRVVDEFTEV LEGLIDGDSI VTSAQFMLDS ESSISSDFKR MEPPEESPTS VFTEVMITDV
MPSHNMITAK HGPIPEWDWP PMTMDFVVAE HINLATVKGG SSAHIEISKQ TDGQYVVTTV
HIIDSAQSTQ ATMSESVWTE VKINSVMDGH RMINVDHPAI KEWDWPAMTM DFNVADNITL
SDLASGTLAH IEISKSSSGE YLVSTIHVVE EASSETSTAV DAVWTQATVN AVMSASNQLS
LEHDPIEAWD WPAMTMDFNV ANEVDLSDIT AGMRLHIEIT KTQDGAYVIT TVHIQASDKG
TMDHSQHEGA HE
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