Gene MADE_00318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00318 
Symbol 
ID6776015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp345738 
End bp347102 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content45% 
IMG OID642753747 
Productputative cation efflux protein 
Protein accessionYP_002124630 
Protein GI196155141 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGGT TTTGTCTTTT TGTTTCTATT TGGGGAGCGT TCTCGTTCTC GATGGTCTCT 
CCCGCTATCG CGAATGAAAA ATTAACGCTC AAACGTGCAG TAGAAATAGC GGTAGAAAAT
GATCCATGGC TCGTTGGCAG TACACATCGT GAACGTGCCA CATTGTCCAG TAGTGTCGTC
GCCTCGAGCC TACCAGACCC CGTTGTCAAC ATCGGTTTAG CAAATGTACC CACTGATGGT
TTTGCGTTTG ATCAAGAGCC CATGACTCAG CTAAAAGTAG GTGTGTCACA GATGTTTCCT
CGTGGTGATT CGTTAGCCAT AAGGTCTCGT CAATTGCGGG AGCAAGCAGC AGAGCATCCC
CTGATGAGAG CCGACCGAGT GGCCAAAGCA CGCGTTCAAG TATCAAACTT ATGGTTAGAA
ATATATCGGG CGCAGCAAAG TGTAAAGCTA ATTGATGAAG ATAAAGCGTT ATTTGAACAG
CTCAGCGATA TCGCAAAGGC AAATTATTCA ACTGCCTTTG GACGCGTAAA TCAGCAAGAT
ATCGTTCGTG CAAAGTTGGA ATTAACAAGG TTGGAAGACC GACTTACTAA ACTACGAGCA
TTAGAAGAAA GAGCCACAGG GAAGCTTCTA GAGTGGCTAG TTAGAGATCA AAATTATCCA
AGTCAATCGG GATTTGATGC CTTTTCTCGA TTAACGTTGC CGCATGCCCT ACCTGAGATC
AAAAACATGG GGCAGAATAT GAGAACAATA CTTGAGCGCA GAGATCAACA ATCGCTTGCA
ATGGTTCTCA ATCAACACCC TTTGATCCTC TCGATAGAGC AAAGAATTCG CGCCAGCCAA
ACCGGTATTG ACCTTGCCAA AGAAAAATAC AAGCCACAAT GGGGGGTTAA CGCTAGTTAC
GCCTACAGAG ACGACACGCC CGACGGTACA AGTCGAGCAG ATTTTTTATC GATGGGTGTA
AGTTTCGATG TACCTCTTTT TACAGAAAAC CGCCAAGACC AAGAGGTTTC GGCTGCCGTA
AGCCTATCTG AAGCCATTAA AACCGACAAG CGCTTAGTCC TCAGAGAAAT GATGTCATAC
ATCCAGTCTT TATATGCGGA AAATGAGCGA TTAATGGAGC GACAAGCGCT GTACGAACTC
GAATTGTTAG AGCAAATGCA AGAGCAAGCT GAGGCATCGC TCAATGCTTA TACCAACGAC
GAAGGAGACT TTGCTGAGGT AGTGCGTGCT CGTATTGCGG ATCTTAATGC CAGAATTGAC
GCACTGGATA TCAGTGTGGA TTTGGTCAAA ACAAAAATTC AACTCAACTA TTACTTTGAT
ACCAACGCAG GTATTCCTTT GTCTCAAATC GGAGAACAAC AATGA
 
Protein sequence
MNRFCLFVSI WGAFSFSMVS PAIANEKLTL KRAVEIAVEN DPWLVGSTHR ERATLSSSVV 
ASSLPDPVVN IGLANVPTDG FAFDQEPMTQ LKVGVSQMFP RGDSLAIRSR QLREQAAEHP
LMRADRVAKA RVQVSNLWLE IYRAQQSVKL IDEDKALFEQ LSDIAKANYS TAFGRVNQQD
IVRAKLELTR LEDRLTKLRA LEERATGKLL EWLVRDQNYP SQSGFDAFSR LTLPHALPEI
KNMGQNMRTI LERRDQQSLA MVLNQHPLIL SIEQRIRASQ TGIDLAKEKY KPQWGVNASY
AYRDDTPDGT SRADFLSMGV SFDVPLFTEN RQDQEVSAAV SLSEAIKTDK RLVLREMMSY
IQSLYAENER LMERQALYEL ELLEQMQEQA EASLNAYTND EGDFAEVVRA RIADLNARID
ALDISVDLVK TKIQLNYYFD TNAGIPLSQI GEQQ