Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00318 |
Symbol | |
ID | 6776015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 345738 |
End bp | 347102 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642753747 |
Product | putative cation efflux protein |
Protein accession | YP_002124630 |
Protein GI | 196155141 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCGGT TTTGTCTTTT TGTTTCTATT TGGGGAGCGT TCTCGTTCTC GATGGTCTCT CCCGCTATCG CGAATGAAAA ATTAACGCTC AAACGTGCAG TAGAAATAGC GGTAGAAAAT GATCCATGGC TCGTTGGCAG TACACATCGT GAACGTGCCA CATTGTCCAG TAGTGTCGTC GCCTCGAGCC TACCAGACCC CGTTGTCAAC ATCGGTTTAG CAAATGTACC CACTGATGGT TTTGCGTTTG ATCAAGAGCC CATGACTCAG CTAAAAGTAG GTGTGTCACA GATGTTTCCT CGTGGTGATT CGTTAGCCAT AAGGTCTCGT CAATTGCGGG AGCAAGCAGC AGAGCATCCC CTGATGAGAG CCGACCGAGT GGCCAAAGCA CGCGTTCAAG TATCAAACTT ATGGTTAGAA ATATATCGGG CGCAGCAAAG TGTAAAGCTA ATTGATGAAG ATAAAGCGTT ATTTGAACAG CTCAGCGATA TCGCAAAGGC AAATTATTCA ACTGCCTTTG GACGCGTAAA TCAGCAAGAT ATCGTTCGTG CAAAGTTGGA ATTAACAAGG TTGGAAGACC GACTTACTAA ACTACGAGCA TTAGAAGAAA GAGCCACAGG GAAGCTTCTA GAGTGGCTAG TTAGAGATCA AAATTATCCA AGTCAATCGG GATTTGATGC CTTTTCTCGA TTAACGTTGC CGCATGCCCT ACCTGAGATC AAAAACATGG GGCAGAATAT GAGAACAATA CTTGAGCGCA GAGATCAACA ATCGCTTGCA ATGGTTCTCA ATCAACACCC TTTGATCCTC TCGATAGAGC AAAGAATTCG CGCCAGCCAA ACCGGTATTG ACCTTGCCAA AGAAAAATAC AAGCCACAAT GGGGGGTTAA CGCTAGTTAC GCCTACAGAG ACGACACGCC CGACGGTACA AGTCGAGCAG ATTTTTTATC GATGGGTGTA AGTTTCGATG TACCTCTTTT TACAGAAAAC CGCCAAGACC AAGAGGTTTC GGCTGCCGTA AGCCTATCTG AAGCCATTAA AACCGACAAG CGCTTAGTCC TCAGAGAAAT GATGTCATAC ATCCAGTCTT TATATGCGGA AAATGAGCGA TTAATGGAGC GACAAGCGCT GTACGAACTC GAATTGTTAG AGCAAATGCA AGAGCAAGCT GAGGCATCGC TCAATGCTTA TACCAACGAC GAAGGAGACT TTGCTGAGGT AGTGCGTGCT CGTATTGCGG ATCTTAATGC CAGAATTGAC GCACTGGATA TCAGTGTGGA TTTGGTCAAA ACAAAAATTC AACTCAACTA TTACTTTGAT ACCAACGCAG GTATTCCTTT GTCTCAAATC GGAGAACAAC AATGA
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Protein sequence | MNRFCLFVSI WGAFSFSMVS PAIANEKLTL KRAVEIAVEN DPWLVGSTHR ERATLSSSVV ASSLPDPVVN IGLANVPTDG FAFDQEPMTQ LKVGVSQMFP RGDSLAIRSR QLREQAAEHP LMRADRVAKA RVQVSNLWLE IYRAQQSVKL IDEDKALFEQ LSDIAKANYS TAFGRVNQQD IVRAKLELTR LEDRLTKLRA LEERATGKLL EWLVRDQNYP SQSGFDAFSR LTLPHALPEI KNMGQNMRTI LERRDQQSLA MVLNQHPLIL SIEQRIRASQ TGIDLAKEKY KPQWGVNASY AYRDDTPDGT SRADFLSMGV SFDVPLFTEN RQDQEVSAAV SLSEAIKTDK RLVLREMMSY IQSLYAENER LMERQALYEL ELLEQMQEQA EASLNAYTND EGDFAEVVRA RIADLNARID ALDISVDLVK TKIQLNYYFD TNAGIPLSQI GEQQ
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