| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00306 |
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| Symbol | |
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| ID | 6776022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 333091 |
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| End bp | 334329 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642753735 |
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| Product | Secretion protein HlyD |
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| Protein accession | YP_002124618 |
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| Protein GI | 196155129 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTTC GCAAATTATT TACCTTAATA GCATTTGCCC ATATTGGCAT TAGCTTATCC
GCAATCAGTA ACCTAGCTGT TGCTGAGTCA GCTAAAGAAA TTACTCAAGA AGAAGTAGAG
AAAGGCCCTA ATAATGGTCG AGTATTGAGA CAGGGTGACC TTGCTATCGA GCTGGCGATT
TATGAAACCG ACACCCCTCC CGAATTTCGT GTATACGCTA GTTATGCAGG ACAGCGAATA
TCAGCTGAAG ACATTGAAGT GAACGTAAAA CTCACGCGTT TGGGAGATGG CATCGATGAC
ATAGATTTTT ATGTTGAGGG CAATTATCTG CGCGGTGACA TGGTTATCTA TGAACCTCAC
TCTTTTTTAG TTTCACTTAC TGCCAATTAC CAAGGCAAAA CATACGAATG GTCTTACGAT
AACTATGAAG GAAGGACAAA AATAGATGAT TCACTAGCAA AGGCTATGGA CATTAAAACC
GATTTCGTAT CGAGTAAAAA ACTTAACGCG CGGTTGAAAG TATATGGCCA GTTAGTTTTA
CCCCCCAATG CAGTGAGGAA TATATCTGCG CGTTATCCAG GCGAAATAAC TTCTGTTGAT
GTCATTTTAG GTCAAGCAGT AAAGAAAGGG CAGACTCTTT TCACTATCCA ATCAAGCGAA
AGCTTGCAAA GTTATCAAGT TAAATCGCCG ATTGATGGCC TAATTACATT TCAGGATATT
GGGGTAGGCG AACAATCGGG AGACAAGAAA CTAGTCGCTA TTACTGATAC CTCGCAATTA
ATAGCAGAGC TGAACGTATA TCCAGAAGAC CAAAACAAGA AATTGTTAGA TGCTCCCGTC
GATATACAAG TTCCGGGTCA CGATAAGACG ATAAGCACTA AAATTTTTGA CAGCCTTTAT
GCCGTTAACG GCTCGCAAGC AAAAGTCTAT CGCGCCATTG TCAATAATAA TGACGGCTTT
TACTCACCAG GACAGTTTAT AACTGCCCAA ATTCTCTTTG ACTCATTCAC CGTTGAAAGA
GCTGTGAAAG AGGAATCCCT TCAGGCTTTT AGAGATTTCA CGGTGGTCTA TGGAAAGTTT
GGTGATCAAT ACGAAGTTCG GATGCTTGAG CTCGGCCGAA AAGCAGAGGG ATGGGTTGAA
GTACTAAACG GCATTCCCTC TGGAACAGAA TATGTCACTC TCAACAGCTA CATAATAAAG
GCTGATATTG AGAAGTCGGG CGCGTCTCAC GACCACTAA
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| Protein sequence | MKLRKLFTLI AFAHIGISLS AISNLAVAES AKEITQEEVE KGPNNGRVLR QGDLAIELAI
YETDTPPEFR VYASYAGQRI SAEDIEVNVK LTRLGDGIDD IDFYVEGNYL RGDMVIYEPH
SFLVSLTANY QGKTYEWSYD NYEGRTKIDD SLAKAMDIKT DFVSSKKLNA RLKVYGQLVL
PPNAVRNISA RYPGEITSVD VILGQAVKKG QTLFTIQSSE SLQSYQVKSP IDGLITFQDI
GVGEQSGDKK LVAITDTSQL IAELNVYPED QNKKLLDAPV DIQVPGHDKT ISTKIFDSLY
AVNGSQAKVY RAIVNNNDGF YSPGQFITAQ ILFDSFTVER AVKEESLQAF RDFTVVYGKF
GDQYEVRMLE LGRKAEGWVE VLNGIPSGTE YVTLNSYIIK ADIEKSGASH DH
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