Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00265 |
Symbol | |
ID | 6776709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 285782 |
End bp | 286615 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642753693 |
Product | rod shape-determining protein MreC |
Protein accession | YP_002124577 |
Protein GI | 196155088 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1792] Cell shape-determining protein |
TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0246577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGTCAG TAACGCTGAT ATTTGTCGAT CACAAAATGG ACGGGTTCAA ATCTACGCGA GTGTATCTAA ACTCTTTAAT GAGCCCCCTT CAGTATATCG CTAACCTCCC CGGACTTATG CTAAGTGAAA GCGCCCAGCG TCTTACTTCA CAAGAGCAAC TATTGACCGA AAATCAAAAG CTCAACAATC AGCTTTTGCT AATGAGCGAA AAGCTTCAGC AATTCGACGT GATCGAAAAC GAAAACGCAC AGCTTAGAGA ATTACTGCAA GCGCCAGTAC GTGAGTCATC CAGAAAGATG GTTGCCGAGT TAATGGCCGT TGACAAGAAC CCCTACAGTC AGCAGGTGGT GATCAACAAA GGCGCGATAG ACGGGGTTTA TCCGTCTCAA CCGGTTATTG ACGACAAAGG GATTGTAGGT CAGGTAATGG AAGTGGGGTC AACGAACAGC CGTGTATTAC TGCTTGCTGA CGTTACTCAC GCTATCCCGG TCCGTTCTCT TCGCAACGAC ATTCGTTTTA TTGCCACGGG GAGTGGCGCC TTAAACGAAT TATATCTTGA GCACGTACCG CACAGCGTTG ACATTCAAGA AGGCGATACG CTTATTTCTT CTGGGTTAGG AAAGGTTTTT CCCGAAGGTT ACCCGGTGGC TACCGTTACC CAAGTGGTAC GCGATGAAAG CCGCCCCTTT GCCCGTGTAA TAGCCACGCC TTTGGCGAAC TTAGACAGGC TTCGTCACCT GCTATTGCTA TGGAAAAAAA CTAATCCTGA GCGCGATGTA AAAGATGAGA CCAAGGGCGA GATGGTAAAC GAGGAAGAAT CGACCGATGC GTAA
|
Protein sequence | MLSVTLIFVD HKMDGFKSTR VYLNSLMSPL QYIANLPGLM LSESAQRLTS QEQLLTENQK LNNQLLLMSE KLQQFDVIEN ENAQLRELLQ APVRESSRKM VAELMAVDKN PYSQQVVINK GAIDGVYPSQ PVIDDKGIVG QVMEVGSTNS RVLLLADVTH AIPVRSLRND IRFIATGSGA LNELYLEHVP HSVDIQEGDT LISSGLGKVF PEGYPVATVT QVVRDESRPF ARVIATPLAN LDRLRHLLLL WKKTNPERDV KDETKGEMVN EEESTDA
|
| |