| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00253 |
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| Symbol | |
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| ID | 6776694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 272479 |
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| End bp | 273735 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642753681 |
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| Product | putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshN (pilus type IV) |
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| Protein accession | YP_002124565 |
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| Protein GI | 196155076 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATCT TAAATGACAC GTTAAAGTCA TTGGACAAGC GCAATCAAAG CGAAGACTTT
GGTTTACCTC CTACGGTTCA CCTCGCACAA CGACCTCTTT GGCCGAAAAT TTTCATCGGC
ATCGCAATTA TTGCCTTATT AGGCTGGTTT GTATTAAGCG CTGTGCTTAG TAACCGTGAT
GACGGTACTA CTGTCAGCAG TACAGAGGCA GATAAATCAG CCGCTCAAGC GCCGGATTCA
ACGCTAACAA AAACCGAGCG TGTGCCGGGG CTCACCCAAA CCGGTAAATC GGCAGGATCC
GACGAACAAG CGGAAGGCCA AACCGGCACT ACAGGCCTTG AAGCCAATGA TGAATTTGAG
GGGATGCGGT CAAGCCCCTT ATCAGAAAAC GATATAGCCC TTCAAAACTC GCCTACCGAT
GTGGCGGCGC TCGTCACTAA TAGCGTTGAT GAGACGCGAG AAGACGATGA AGCGCAGTAC
CGAGTGGGCG CTTCAGATAG TAGGAAAGAT ACACCAATCG AAACAATACC AGTTAAAGCA
ACGCCAGCCG AATCTGCACC AGACGAGGCA GCACCGGCCG AGACAGGCGC GGCAGAAACA
ATGTTAACTG AAACAAAGTC AGCTGAAATA ATATCGCGAC CGCCTGTGGT AGAAGTGGCG
CCTAAAACCC CTCAGCAGCA AAGTGCAGTG CACTTAGAGG CTGGCTTAAA GGCTTATAAC
TTTGGCATGT ATGGTGAAGC GCAGAAAAGC TTCACCCTGG CACTTTCTAC CCACCCTGAA
AATGACGAAG CCCGTAAACA GCTGGCGGCA CTTTACTTTG GGCAGAACAA TAGCCTACAA
GCGCTGCAAG TTCTGTCTGA GGGAGTGATG CTTTCGCCTC AGAGCTTAAT GTGGCGGGAA
TTGATGGCGA AAATTTTGAT GCAAGAAAGC CGTTTTGAAG AAGTGCTAAA CCTTATGCCA
GACAGCTTAG ACGCCAAAGC GTTAGCTGAA GGACGCGCCG ATTACTTAAT TATAAAGGGC
ACGTCAGCCC AGACCATTAA CAAACCAGCA CAAGCGGTGT CGGCATTCAG TGCCATGACA
TCGCTACAGC CCAATAACGC GAAATGGTGG CTGGCGTTAG GGGTTAATTA CGATGCGTTA
GCAGACGAGC GGCTAGCAAT ATCGTCTTAT TCCAGAGCGC TTGCCATAGG CGGTCTTTCT
TCTGCGTCAG CGAAATATGC TAGCTCGCGT CTCACCGAAT TACAGGAGCA ACCTTAA
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| Protein sequence | MSILNDTLKS LDKRNQSEDF GLPPTVHLAQ RPLWPKIFIG IAIIALLGWF VLSAVLSNRD
DGTTVSSTEA DKSAAQAPDS TLTKTERVPG LTQTGKSAGS DEQAEGQTGT TGLEANDEFE
GMRSSPLSEN DIALQNSPTD VAALVTNSVD ETREDDEAQY RVGASDSRKD TPIETIPVKA
TPAESAPDEA APAETGAAET MLTETKSAEI ISRPPVVEVA PKTPQQQSAV HLEAGLKAYN
FGMYGEAQKS FTLALSTHPE NDEARKQLAA LYFGQNNSLQ ALQVLSEGVM LSPQSLMWRE
LMAKILMQES RFEEVLNLMP DSLDAKALAE GRADYLIIKG TSAQTINKPA QAVSAFSAMT
SLQPNNAKWW LALGVNYDAL ADERLAISSY SRALAIGGLS SASAKYASSR LTELQEQP
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