| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00252 |
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| Symbol | |
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| ID | 6775302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 271580 |
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| End bp | 272482 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642753680 |
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| Product | putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshM (pilus type IV) |
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| Protein accession | YP_002124564 |
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| Protein GI | 196155075 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCAGG GCTTTTTTCA CTTTACCGAG ATGCCGTTTT CGCTTACCCC GAATACGGAC
TTCTTCTGCG CGCTAGCGCC GCATAATGAA GCGTTGAAAG TCATTTTGTC GGCGTTGAGT
ATGTCTGAAG GCTTTATCAA AGTAACCGGT GAAGTTGGTA CGGGTAAAAC CCTACTGTGC
CGTAAGTTAA TCAACCACCT TTCTGACAAA TTTGTGGCTT GCTATTTACC CAACCCTTAC
CTATCACCAG ATGAGCTTCG CTTAGCGTTT GCAAAAGAGC TCGGTATTGA TGTCGATACT
ACAGGCGATA TTCGGGGCTT GCACAGCGCC ATAGAGGCCA AGCTTTTAAC CCTTAAAAAA
GAGGGCCGAC AGGCGGTGCT GATCATTGAT GAAGCACAGT CGCTAAGTTG GGACGCCCTA
GAAATGCTTC GGCTGTTTAG TAATCTCGAA ACGGAAAAAA GCAAGCTGCT TCAAATTGTT
TTATTTGGTC AACCTGAACT TGACGATAAC TTAAATAACC CAAAAGTGAG GCAAATTCGC
CAGCGTATTA GTTTTTCATA TAGGTTACGC ACCATGACTT CTGCTGAGGT TGATTATTAC
ATTGGCCATA GGTTGACCAC GGCAGGGGGG AGCGAACACT TAATCTCCAA AGGCTTGCGT
GCCTTTGTTG CTTTGGCTAC TAAAGGTACG CCAAGGCTGG TTAATATTGT CTCTCACAAA
ATCCTTCTTC GCGCTTATGG TCAGGGTAAA GCTTCAGCGA ACTGGGCGCA TACGGTTAGC
GCCGTATTAG ATACCGACGA TTGCAAGCGC CGTCTTGTAC CGAGGCAAAG CATTATTATT
TTGTCGCTTG GCGTAGTCGC CGCGCTGGGT ATGCTTCACG TATACGGGGC GGCTAGCCTA
TGA
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| Protein sequence | MYQGFFHFTE MPFSLTPNTD FFCALAPHNE ALKVILSALS MSEGFIKVTG EVGTGKTLLC
RKLINHLSDK FVACYLPNPY LSPDELRLAF AKELGIDVDT TGDIRGLHSA IEAKLLTLKK
EGRQAVLIID EAQSLSWDAL EMLRLFSNLE TEKSKLLQIV LFGQPELDDN LNNPKVRQIR
QRISFSYRLR TMTSAEVDYY IGHRLTTAGG SEHLISKGLR AFVALATKGT PRLVNIVSHK
ILLRAYGQGK ASANWAHTVS AVLDTDDCKR RLVPRQSIII LSLGVVAALG MLHVYGAASL
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