Gene MADE_00249 details

Gene Information

• Locus tag: MADE_00249
• ID: 6776657
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: +
• Start bp: 268862
• End bp: 269509
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 642753677
• Product: putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshJ (pilus type IV)
• Protein accession: YP_002124561
• Protein GI: 196155072

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCAGT ACCAACAACT CTCTGAAAAG TTTTCGGCCC TTGAGGGGAG AGAAAAGCAG 
CTTATTTTAT GGGTGAGTTT TGGCCTCATC GTATATCTGT TCTTCTGGTT TGGTATTTTG 
CCCGCGCTTG ACGATTTATC AACAGCCGAC AAAGCAGTGA AAAGAAAAAG CAGTGAGTAC 
AACGCCTTGG TTATTCAACG AGATGCCGTT CAACAGGCGC TTTCTATCGA TTACACGCAG 
CGCACCCAGC AAGAGCTGGA TAGCGCAAGA AAAGCCTTAC TTGCGATAGA TGAAGAGCTA 
CTTTCATTGA ACGAAGGGTT CGTGGCAGCA GACAGAATGC CGGAATTACT GATGACGCTA 
TTAAACGAAG AAAACAACGT GCGTTTGGTT AATTTCAACG TTGAGCCTAC TCAAATCGTT 
CGCTTTGGCG AGGGAGAGTC GCAAAGCACG CCGTTTTATC GTCATAACAT GCGCTTAATT 
ATTGAAGGTA GTTATTTTGA CCTACGCGGC TATTTAGCGC GTCTTCAAGC GTCGCCAGAA 
AAGGTGATAG TAACTGACTT TGCTTACCAC GTTGCACAAT ACCCAAACGC TACATTGGCG 
CTTGGTCTGG CAACGGTTAG CAATAACGAA ACCTTTATTT CGCTGTAA 

 

Protein sequence

MSQYQQLSEK FSALEGREKQ LILWVSFGLI VYLFFWFGIL PALDDLSTAD KAVKRKSSEY 
NALVIQRDAV QQALSIDYTQ RTQQELDSAR KALLAIDEEL LSLNEGFVAA DRMPELLMTL 
LNEENNVRLV NFNVEPTQIV RFGEGESQST PFYRHNMRLI IEGSYFDLRG YLARLQASPE 
KVIVTDFAYH VAQYPNATLA LGLATVSNNE TFISL