| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00243 |
|---|
| Symbol | |
|---|
| ID | 6775723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 263268 |
|---|
| End bp | 264026 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 642753671 |
|---|
| Product | Glycerol-3-phosphate regulon repressor |
|---|
| Protein accession | YP_002124555 |
|---|
| Protein GI | 196155066 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAAA CACAAAGACA CGAAAAAATT GTTGGCCTTA TTAAGCAGCA TGGTTTCATG
TCTATTGATG ATTTGGTTAG TGCTTGCGAC GTTACGCCGC AAACTATTCG ACGAGATTTA
AATCAACTTG CTGAAAGTGG CGTAGTGAGC CGTTACCACG GCGGGGCGGG GTTAAATAGA
AGTTGGGAAA ATACCCCTTA TCAAGAGCGA AAGACCCAAA ACAGTGAAGT GAAGGAGAAA
ATCGCCGAAG CTGTGGCGGC AATGATACCC GATGGTGCTT CATTGTTTAT CAACATCGGT
ACAACCACAG AGATGATTGC TACAAAGCTG CTCAACCATA AAAATCTCCA CGTTGTAACG
AACAATATTC ACGTTGCTAC TATTCTTTCC GCCAAAGAGG ATTTCTCTGT CATTATTGCT
GCAGGTGAAG TGCGGTACCG AGATGGCGGA ATTATTGGTG AGGCTACGTG CGATTTTATC
AGTCAGTTTC GTATGGACTA TGGCATTATC GGTATTTCGG GAATAAGTGC AGATGGCGCA
TTACTCGATT TCGACTTCAG AGAAGTAAAA GTTTCACAGG CCATATTGGA ACACACCCAA
CACGTTATTC TTGCAGCTGA CTATAGTAAA TTCGAGCGTC GGGCTATGGT AGAGCAGGGG
CATATATCTC AAGTAGACTG CCTTGTTTGC GACAAAACTC CTCCACCGGC TATCAGTGAC
ATTATTGAAG AAAACAATAT AGCTTTTGTT AAAGCTTGA
|
|---|
| Protein sequence | MNQTQRHEKI VGLIKQHGFM SIDDLVSACD VTPQTIRRDL NQLAESGVVS RYHGGAGLNR
SWENTPYQER KTQNSEVKEK IAEAVAAMIP DGASLFINIG TTTEMIATKL LNHKNLHVVT
NNIHVATILS AKEDFSVIIA AGEVRYRDGG IIGEATCDFI SQFRMDYGII GISGISADGA
LLDFDFREVK VSQAILEHTQ HVILAADYSK FERRAMVEQG HISQVDCLVC DKTPPPAISD
IIEENNIAFV KA
|
|---|
| |