Gene MADE_00241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00241 
Symbol 
ID6775746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp258519 
End bp261176 
Gene Length2658 bp 
Protein Length885 aa 
Translation table11 
GC content46% 
IMG OID642753669 
ProductTonB-dependent receptor 
Protein accessionYP_002124553 
Protein GI196155064 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID[TIGR01782] TonB-dependent receptor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0334138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACAC AATTCAAGTT AGGTTTGACT GCACTTGCGG TAGCGCAATG CTTAAATATC 
AGCATTGCTT CAGCACAAGA AGCGGCCGAT GTTGATAAAC AAGTTGATAT CAGCGAAACC
GAAGTTATCA CTGTCCGTGG TTTCGGTAGC ACATTAACCC GTTCACTACA GCATAAGAAG
TTAGCTGATT CGACGGTAGA AATTATCTCC ACGGATGACC TGGGACAACT TCCCGATGTG
ACAATCACTG ATGCCCTCGC GCGCTTACCG GGTATTGCAG CAGACCGTGA TCGCGGAAAC
GCGAGTCAGA TTTCTATTCG AGGTATGGGG CCGCGCCTTA ACCTTGCAAC CATGAATGGC
CGAGAAATTG TTAGCGGTGA ACCAAGTCGT AGTGTTCGTT ATGAACAATT CCCTGCGGAG
CTTATTAGCT CAGTTGAAGT ATTTAAAAGC CCTTTAGCAA GTAATATTGA AGGGGGTATC
TCTGGCCTAG TTAACATGCA GTTCGTTGAA CCCTTGACCA AAGATGAAAG GGCCGTCAAC
ATCAGCGGGC ACTTGATGAG TTACCCTTTA GCTGACGATA TTCCCACAGC CGACTCCCAA
GGTTATCGCG CTAATTTCAG TTATATCGAC CCTATTTCAG ATACATTTGG TATTGCGTTT
GGCGTTGCCG TTCAAGACCA ACCCTCGCTA CAAAAAGATG TTACCTCGTG GGAATACAAC
AATGTTCCGG CTGATCAGGG TGATGTTAAT GGTAATGGCA TCCCTGAAGC GGCCCCTTGG
GGAGCACAGA CGGCTACGAA AGGCGGTGAC AACCAGAGAA TTGGTGCAAT GACGGTACTT
CAATGGCTAC CAAATGAAAG TTTAGAGCTA AAGTATGACC TCTTTTATTC CAAATTTGAT
ATTGAAGAAC GAGAAGACCA AATCTGGTTC GACGGCTGGG GTAACTGGGG TGGCTTAAAT
AACTGGAACG TTGCAAATGC CAGTAACCCA CCGCAAATCA TTACTAAACC CGATGGTTCA
GAACAAATTG TTGCAGGTGG AATGTTGTGG GGCGGTAGCC ACACTGCAAA TAATTCTACT
TGGTTCCAAG AAAACGAACT TGTCAGTACA GGCTTAAATG CTGAATGGTT AGGTGACGTT
TGGAAGGTAA ATGCGGACAT TGGCTATTCA GAAGCTTCAA TAACTTCTCG CTGGGTGAAC
ATTCAGTCTT GGTATTGGGA TGCAGATGCT GATGCAAACG GCATGGACTA TAGCTGGGAC
ACTACCGCTG AGCGCTTATC CATTGGCACT GGTTATGACA TGAGCGATGT TACGGATTAC
GGTCTTGATT ATATGCAGGT GGACAACGAC CGCCTGTTAG AAGATGAAAT GATCACTGCC
AAGCTTGATT TCTCTCGACC TATCGAGTGG GGAATTATTG ATGCAATGAG CTTCGGCGGG
CGTTGGACAG ATAGAGAAAA AGACAATGAT GTGGTTAGCT GGCAACAAAG TGTAGCCAAT
AGCAGTGCCA ATGTAGACGC CTTTACTTAC GAGCTTGGTG AAGGCTATGG CGTCCCTGCG
CTTTACAGCA TAAAAAATTG GTCAGAAGTA GCGCAGGAAG CGTTTGGCGG GATAGATAAC
CGCAACCAGC ATACCCAGAC TAATGCCGAT ATACTTAATA GCTGGAATGT TCAAGAAACT
AATACTGCAT TGTACGTTCA GTTTAATCTG TTAGGTGAAA TTGGCGGTAT CTCGTACACA
GGTAATGTAG GTGTGCGCTA CATCAATACC GAATCTACTT CAACAGGTTT CCAGCAAGCT
GACGGGGGAG AGCTAACTGC GGTATCGATT GACCATGACT ACAGTGAGGT GCTGCCTGCG
CTAAACTTAC GTTTTGACAT TACGGACGAT TCGCAAATTC GCTTTGGACT TTCACGTGCT
ATATCTCGTC CGCCACTCAT TGAAATGCGT ACAGGCTTAC AAATTAATAC ATCTTCTACA
GTTAACTCTG CTTCTGGCGG TAACCCTCAG CTAAATCCGT TCATCGCGGA TCAAGTTGAC
CTGGGCTATG AATATTTCTT TGCTGAAGAT GCTGCTCTTA CCGTGTCACT CTTCTTCAAA
GACCTAAAGA GTCATGTAGG TGCTGCTACA GATACTCTTA ATATCAATGG TGAGAGTTAC
CAATTTACCG GCCCAGTGAA CGGTGATGGT GGCCAGATTC GCGGCGTTGA AGTGATGTAT
CAGCAAGCGT TTAACATGTT GCCAGAACCT TTTGATGGCT TGGGGATTTA TACCAACTAC
AGCTATACAG ATACGAATGT GACTGAGTTT GAGCCTGAAA ACAACCCATT GACTATGGGG
GGCTTATCTA AAAATGTAGG TAGTTTAACC CTTTGGTATT ACAAAGCAGG TATTGATGCG
AAGGTGTCAT ATAACTACCG CAGTGCATAC ACTAGCGTAG GTAGCTGGGA CCCAGGTGCC
GTTTTCACTA TAGATGACGA AGCCACGGTT GATGCCAGCA TTGCCTACGA AGTGACCGAA
AACTTCAAAG TAATGTTACA AGGGCAGAAC CTAACGAATG AAGCGTCTAC GTCATACTTT
GACAACGACC CTACCCGACC ACGTCAATAC GCTGAATGGG GACGCCGTTA CTTGTTAGGC
TTCCAATACG CGATGTAA
 
Protein sequence
MKTQFKLGLT ALAVAQCLNI SIASAQEAAD VDKQVDISET EVITVRGFGS TLTRSLQHKK 
LADSTVEIIS TDDLGQLPDV TITDALARLP GIAADRDRGN ASQISIRGMG PRLNLATMNG
REIVSGEPSR SVRYEQFPAE LISSVEVFKS PLASNIEGGI SGLVNMQFVE PLTKDERAVN
ISGHLMSYPL ADDIPTADSQ GYRANFSYID PISDTFGIAF GVAVQDQPSL QKDVTSWEYN
NVPADQGDVN GNGIPEAAPW GAQTATKGGD NQRIGAMTVL QWLPNESLEL KYDLFYSKFD
IEEREDQIWF DGWGNWGGLN NWNVANASNP PQIITKPDGS EQIVAGGMLW GGSHTANNST
WFQENELVST GLNAEWLGDV WKVNADIGYS EASITSRWVN IQSWYWDADA DANGMDYSWD
TTAERLSIGT GYDMSDVTDY GLDYMQVDND RLLEDEMITA KLDFSRPIEW GIIDAMSFGG
RWTDREKDND VVSWQQSVAN SSANVDAFTY ELGEGYGVPA LYSIKNWSEV AQEAFGGIDN
RNQHTQTNAD ILNSWNVQET NTALYVQFNL LGEIGGISYT GNVGVRYINT ESTSTGFQQA
DGGELTAVSI DHDYSEVLPA LNLRFDITDD SQIRFGLSRA ISRPPLIEMR TGLQINTSST
VNSASGGNPQ LNPFIADQVD LGYEYFFAED AALTVSLFFK DLKSHVGAAT DTLNINGESY
QFTGPVNGDG GQIRGVEVMY QQAFNMLPEP FDGLGIYTNY SYTDTNVTEF EPENNPLTMG
GLSKNVGSLT LWYYKAGIDA KVSYNYRSAY TSVGSWDPGA VFTIDDEATV DASIAYEVTE
NFKVMLQGQN LTNEASTSYF DNDPTRPRQY AEWGRRYLLG FQYAM