| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00241 |
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| Symbol | |
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| ID | 6775746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 258519 |
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| End bp | 261176 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642753669 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002124553 |
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| Protein GI | 196155064 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0334138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACAC AATTCAAGTT AGGTTTGACT GCACTTGCGG TAGCGCAATG CTTAAATATC
AGCATTGCTT CAGCACAAGA AGCGGCCGAT GTTGATAAAC AAGTTGATAT CAGCGAAACC
GAAGTTATCA CTGTCCGTGG TTTCGGTAGC ACATTAACCC GTTCACTACA GCATAAGAAG
TTAGCTGATT CGACGGTAGA AATTATCTCC ACGGATGACC TGGGACAACT TCCCGATGTG
ACAATCACTG ATGCCCTCGC GCGCTTACCG GGTATTGCAG CAGACCGTGA TCGCGGAAAC
GCGAGTCAGA TTTCTATTCG AGGTATGGGG CCGCGCCTTA ACCTTGCAAC CATGAATGGC
CGAGAAATTG TTAGCGGTGA ACCAAGTCGT AGTGTTCGTT ATGAACAATT CCCTGCGGAG
CTTATTAGCT CAGTTGAAGT ATTTAAAAGC CCTTTAGCAA GTAATATTGA AGGGGGTATC
TCTGGCCTAG TTAACATGCA GTTCGTTGAA CCCTTGACCA AAGATGAAAG GGCCGTCAAC
ATCAGCGGGC ACTTGATGAG TTACCCTTTA GCTGACGATA TTCCCACAGC CGACTCCCAA
GGTTATCGCG CTAATTTCAG TTATATCGAC CCTATTTCAG ATACATTTGG TATTGCGTTT
GGCGTTGCCG TTCAAGACCA ACCCTCGCTA CAAAAAGATG TTACCTCGTG GGAATACAAC
AATGTTCCGG CTGATCAGGG TGATGTTAAT GGTAATGGCA TCCCTGAAGC GGCCCCTTGG
GGAGCACAGA CGGCTACGAA AGGCGGTGAC AACCAGAGAA TTGGTGCAAT GACGGTACTT
CAATGGCTAC CAAATGAAAG TTTAGAGCTA AAGTATGACC TCTTTTATTC CAAATTTGAT
ATTGAAGAAC GAGAAGACCA AATCTGGTTC GACGGCTGGG GTAACTGGGG TGGCTTAAAT
AACTGGAACG TTGCAAATGC CAGTAACCCA CCGCAAATCA TTACTAAACC CGATGGTTCA
GAACAAATTG TTGCAGGTGG AATGTTGTGG GGCGGTAGCC ACACTGCAAA TAATTCTACT
TGGTTCCAAG AAAACGAACT TGTCAGTACA GGCTTAAATG CTGAATGGTT AGGTGACGTT
TGGAAGGTAA ATGCGGACAT TGGCTATTCA GAAGCTTCAA TAACTTCTCG CTGGGTGAAC
ATTCAGTCTT GGTATTGGGA TGCAGATGCT GATGCAAACG GCATGGACTA TAGCTGGGAC
ACTACCGCTG AGCGCTTATC CATTGGCACT GGTTATGACA TGAGCGATGT TACGGATTAC
GGTCTTGATT ATATGCAGGT GGACAACGAC CGCCTGTTAG AAGATGAAAT GATCACTGCC
AAGCTTGATT TCTCTCGACC TATCGAGTGG GGAATTATTG ATGCAATGAG CTTCGGCGGG
CGTTGGACAG ATAGAGAAAA AGACAATGAT GTGGTTAGCT GGCAACAAAG TGTAGCCAAT
AGCAGTGCCA ATGTAGACGC CTTTACTTAC GAGCTTGGTG AAGGCTATGG CGTCCCTGCG
CTTTACAGCA TAAAAAATTG GTCAGAAGTA GCGCAGGAAG CGTTTGGCGG GATAGATAAC
CGCAACCAGC ATACCCAGAC TAATGCCGAT ATACTTAATA GCTGGAATGT TCAAGAAACT
AATACTGCAT TGTACGTTCA GTTTAATCTG TTAGGTGAAA TTGGCGGTAT CTCGTACACA
GGTAATGTAG GTGTGCGCTA CATCAATACC GAATCTACTT CAACAGGTTT CCAGCAAGCT
GACGGGGGAG AGCTAACTGC GGTATCGATT GACCATGACT ACAGTGAGGT GCTGCCTGCG
CTAAACTTAC GTTTTGACAT TACGGACGAT TCGCAAATTC GCTTTGGACT TTCACGTGCT
ATATCTCGTC CGCCACTCAT TGAAATGCGT ACAGGCTTAC AAATTAATAC ATCTTCTACA
GTTAACTCTG CTTCTGGCGG TAACCCTCAG CTAAATCCGT TCATCGCGGA TCAAGTTGAC
CTGGGCTATG AATATTTCTT TGCTGAAGAT GCTGCTCTTA CCGTGTCACT CTTCTTCAAA
GACCTAAAGA GTCATGTAGG TGCTGCTACA GATACTCTTA ATATCAATGG TGAGAGTTAC
CAATTTACCG GCCCAGTGAA CGGTGATGGT GGCCAGATTC GCGGCGTTGA AGTGATGTAT
CAGCAAGCGT TTAACATGTT GCCAGAACCT TTTGATGGCT TGGGGATTTA TACCAACTAC
AGCTATACAG ATACGAATGT GACTGAGTTT GAGCCTGAAA ACAACCCATT GACTATGGGG
GGCTTATCTA AAAATGTAGG TAGTTTAACC CTTTGGTATT ACAAAGCAGG TATTGATGCG
AAGGTGTCAT ATAACTACCG CAGTGCATAC ACTAGCGTAG GTAGCTGGGA CCCAGGTGCC
GTTTTCACTA TAGATGACGA AGCCACGGTT GATGCCAGCA TTGCCTACGA AGTGACCGAA
AACTTCAAAG TAATGTTACA AGGGCAGAAC CTAACGAATG AAGCGTCTAC GTCATACTTT
GACAACGACC CTACCCGACC ACGTCAATAC GCTGAATGGG GACGCCGTTA CTTGTTAGGC
TTCCAATACG CGATGTAA
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| Protein sequence | MKTQFKLGLT ALAVAQCLNI SIASAQEAAD VDKQVDISET EVITVRGFGS TLTRSLQHKK
LADSTVEIIS TDDLGQLPDV TITDALARLP GIAADRDRGN ASQISIRGMG PRLNLATMNG
REIVSGEPSR SVRYEQFPAE LISSVEVFKS PLASNIEGGI SGLVNMQFVE PLTKDERAVN
ISGHLMSYPL ADDIPTADSQ GYRANFSYID PISDTFGIAF GVAVQDQPSL QKDVTSWEYN
NVPADQGDVN GNGIPEAAPW GAQTATKGGD NQRIGAMTVL QWLPNESLEL KYDLFYSKFD
IEEREDQIWF DGWGNWGGLN NWNVANASNP PQIITKPDGS EQIVAGGMLW GGSHTANNST
WFQENELVST GLNAEWLGDV WKVNADIGYS EASITSRWVN IQSWYWDADA DANGMDYSWD
TTAERLSIGT GYDMSDVTDY GLDYMQVDND RLLEDEMITA KLDFSRPIEW GIIDAMSFGG
RWTDREKDND VVSWQQSVAN SSANVDAFTY ELGEGYGVPA LYSIKNWSEV AQEAFGGIDN
RNQHTQTNAD ILNSWNVQET NTALYVQFNL LGEIGGISYT GNVGVRYINT ESTSTGFQQA
DGGELTAVSI DHDYSEVLPA LNLRFDITDD SQIRFGLSRA ISRPPLIEMR TGLQINTSST
VNSASGGNPQ LNPFIADQVD LGYEYFFAED AALTVSLFFK DLKSHVGAAT DTLNINGESY
QFTGPVNGDG GQIRGVEVMY QQAFNMLPEP FDGLGIYTNY SYTDTNVTEF EPENNPLTMG
GLSKNVGSLT LWYYKAGIDA KVSYNYRSAY TSVGSWDPGA VFTIDDEATV DASIAYEVTE
NFKVMLQGQN LTNEASTSYF DNDPTRPRQY AEWGRRYLLG FQYAM
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