| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00239 |
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| Symbol | |
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| ID | 6775661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 256059 |
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| End bp | 258350 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642753667 |
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| Product | beta-galactosidase |
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| Protein accession | YP_002124551 |
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| Protein GI | 196155062 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCTT CTAATCCACC GCATTCTTCA TCGCCTTTTC TAAGTGAAGT AGTTCCTTTC
AATCAAGACT GGCAGTTTAA GAAGGCGGAT GAGGCGCTTA CGCCTGAGCA AATAACCCAA
GCATGGGAAA ACATTGCTCT TCCACATACT CCCCGGTTAG AGCCTGAAGT GGTAAACGAC
CAATGGCAAG GTGTTGCCTG GTATCAAAAA TCGTTTTCAG TGCCGGCAGA ATGGCTTGAG
CAAGCGGTGT TGATTCGTTT TGAGGGCGCA ATGAATGCTA CAGAAGTTTG GCTTAATGAT
GAGAAAGTGG GTACTCACTT AGGTGGATAT CTGCCGTTTA CTCTCGATTT AAGCCCTTAC
CTCGTGTTAG GAAGGAATAC CCTCCGCGTT CGTTTAGATA ACCGTGACAA TGACGTGACT
GGCCCGAAGC CACTTACATT GCTTGATTTT AATACCTACG GTGGCTTATA TCGCGATGTT
AATCTTCTGG TAAAAAACAC CTTGATGATT ACTGATGAGA TGCACGCTAA CGAAGTAGCC
GGTGGCGGTG TTTTTGTAAC CTTCCCTTTT GTAGATAAAG TGAAATCTGA AGTAAACATT
AAAACGCATG TAGCTAACAC CAGCGGCGAA GAAAAAACGT TTACCCTTAC CCAAACTTTG
TCATTTGATG GAAGTGAAGT TCATGAGGTA AGCCAACAAT ACACCCTGCC GGCAGGTGAA
AAGCGTCATT TTAATCAGTT AATTACAGTA GCTGAACCTG CCTTATGGTC TCCTCAGCAC
CCCAACTTAT ACACACTGGA CACTGTATTG TCGCATGGCG ATACAACTAT AGAACATCAA
TCGCGAAACA TCGGTATTCG CTCTTTTGTC TTCAATGATA AAAATGAGCT ACTGATAAAC
GGTGAAAAAA CCTTTCTTCG CGGTGTCAAC CGCCACCAGG AATATCCGTT TGTCGGCTAC
GCAACCTCTG CTCAGGCTGA TTACCGCGAT GCCGTAAAAA TCAAATCGGC GGGTTTCGAC
TACGTTCGAT TGTCCCACTA CCCTCACTCA ACAGCATTTA TGAAGGCGGC TGACGAACTG
GGCTTAGTAT TACTGGATGC AATATTGGGT TGGCAATATT ACAACCCCAC TAAAGAGTTC
GAAGCTCATA CCTTAAAAGC GTGTGCTGAT TTACTACGCC GAGACCGTAA TCACGCTAGC
GTCATTGCAT GGGAGTGCTC ATTAAACGAA TCAGACATGC CGGGCGAATT TATCGCAGCA
CTATCTGATA CAGTACATGC CGAATACCCT GGCGCCTATT CCGCAGGATG GGAACTAGGC
TACGATATTT TTGTACAAGC CCGTCAACAC CGACTTCAGC ATTACGAAAC ACCCACAGTC
CCTTACATTG TATCTGAGTA CGGGGACTGG GAATATTACG CGCAAAACGC GGGTTTAAAT
CAGGATAGCT GGCAAGATTT GCAGGAAGAT GAGCGTACTA GCCGTCAATT ACTAAATAGC
GGTGAAAAGC GCCTGCTGCA ACAGGCAAAG AACCTTCAAG AAGCCCACAA TGACAACTTT
ACCGTACCCG CCTTTGCAGA CGGTTACTGG GTAATGTTTG ATTATAACCG CGGCTATGCC
GATGACATTG AAGCTTCGGG TATCGCCAGT ATTTATCGTC AGCCTAAATT CAGCTATTAC
TTTTTCCAAA GTCAACGGAA TGCAGGCGAA CACGCCCCGC AATTTGAAAG CGGTCCCATG
GTGTATATCG CAAGTAATTG GGATGAAACG TCAAGCACTA ATGTGCGCGT TTTCTCAAAT
GCCGAGCGCG TCGCGCTTTA CCTCAACGAT CGCTTAATTG CGACGCAAAG CCCCGACACT
GATGCTTTGA GTACGCACTT AGCGCATCCT CCCTTTACCT TCTCAATAGA TAACTTCGAG
CCTGGTACAT TGCGTGCTGA AGCGCTAATT AGTGAGAATA TTGTCGCTCG TCATAGTGTC
ACAACGCCAG AGAACGCCAC TGCGCTAACG CTACGACTCG ACACCTCAGG TATTGCTCCT
ACTCCCTACG TGAAAGACAA AGTATTTATA TACGCACAAA TGGTAGATGC TAAGGGCAAT
CCTGTTCGCA CAAATAACAT CGAGCTGAAT GCTGAAGTTG AAGGCGATAT TAAATTATTA
AATCAAAGCC CCATTACCAC CTCTCAGGGA GAAGGCGCTT TATTAATTGA AATTGGTGAA
ACACTTAAAA ACGCCAAAAT CACGGTTACT GCCAAAGGTC TAAAACCTGC AACATTATCA
CTTGAAAAGT AA
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| Protein sequence | MSSSNPPHSS SPFLSEVVPF NQDWQFKKAD EALTPEQITQ AWENIALPHT PRLEPEVVND
QWQGVAWYQK SFSVPAEWLE QAVLIRFEGA MNATEVWLND EKVGTHLGGY LPFTLDLSPY
LVLGRNTLRV RLDNRDNDVT GPKPLTLLDF NTYGGLYRDV NLLVKNTLMI TDEMHANEVA
GGGVFVTFPF VDKVKSEVNI KTHVANTSGE EKTFTLTQTL SFDGSEVHEV SQQYTLPAGE
KRHFNQLITV AEPALWSPQH PNLYTLDTVL SHGDTTIEHQ SRNIGIRSFV FNDKNELLIN
GEKTFLRGVN RHQEYPFVGY ATSAQADYRD AVKIKSAGFD YVRLSHYPHS TAFMKAADEL
GLVLLDAILG WQYYNPTKEF EAHTLKACAD LLRRDRNHAS VIAWECSLNE SDMPGEFIAA
LSDTVHAEYP GAYSAGWELG YDIFVQARQH RLQHYETPTV PYIVSEYGDW EYYAQNAGLN
QDSWQDLQED ERTSRQLLNS GEKRLLQQAK NLQEAHNDNF TVPAFADGYW VMFDYNRGYA
DDIEASGIAS IYRQPKFSYY FFQSQRNAGE HAPQFESGPM VYIASNWDET SSTNVRVFSN
AERVALYLND RLIATQSPDT DALSTHLAHP PFTFSIDNFE PGTLRAEALI SENIVARHSV
TTPENATALT LRLDTSGIAP TPYVKDKVFI YAQMVDAKGN PVRTNNIELN AEVEGDIKLL
NQSPITTSQG EGALLIEIGE TLKNAKITVT AKGLKPATLS LEK
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