Gene MADE_00230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00230 
Symbol 
ID6775358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp244884 
End bp245906 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content45% 
IMG OID642753658 
Productaldose 1-epimerase 
Protein accessionYP_002124542 
Protein GI196155053 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2017] Galactose mutarotase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA ACGTATCTGT ATTCGGTGAA GTAAACGGTA ACACGGTCAA CGCTTTCACA 
TTAAATAACG CCAATGGCAT GTCTGTTACC TTGCTAAATT ACGGCGGTAT TATAAAAGAC
ATCACTGTGC CAAATGCCGA GGGAAAACCA ATACACTGTG TTCAGACCTT TGATACTTTG
CAAGAGTACA TCGACGACCC TAGCTATCGC AGCGCGATTG TAGGGCGTTA TGCAAATAGA
ATAGGTCATG GCACCTTTTG CTTAAACGGT ACGCAGTACA CGCTGGATAA AAATGGTGGA
GAGCACAACC TACACGGCGG TTTTGCTGGT TTTCACAAAA AAATATGGCA GGCAAGTACG
AACGAGTTAG ACAACAGTGC TAGCGTAACC TTTAAACTGC ACAGTCCTGA CGGGGAAGGC
GGTTTTCCGG GTAATGTGAA AGTTGAAGCC TGTTATACAT TAAACAATAA CAATGAACTT
TCACTCGAAC TTTCTGCTAC GACAGACAAA GAAACCCCGT TGAGCTTTAC CCAACACGCG
TACTTTACCT TGAGCAATGA CGATAAAGTG GGGAGTACCC TGCTACACAT TGATGCTGAA
CAAGTGACTG ATGCCGACAG CTCGCTATTA CCGACCGGTA AATTAGTGGA CATTGGCGGT
ACGCCATTCG ATTTCTTATC ACTAACCCCC ATTGAAAAAA GAGCGAGTCA ACAAGCATCG
CATGCGTTGT TTGATATGGT TGGTGGGTAC GATCACAACT ACGTACTTCG TGCGGCAAAG
GGTAGTGAAC CCCAAGCCAC TGTAATGGCG CCTGATACAG GTATTTCGAT GGAGTTATTC
ACTACACTAC CAGGCTTGCA GTTTTATACA GGTAGCCTTG ATAGTGATGA ACAACTCGGC
GCCCTGTGTT TAGAGCCACA ACATTTTCCC GATGCGCCGA ATAAGCCGGC TTTCCCTAAC
TGCTTCGTTA AGCCTGAGGA AACCTTTAAA GCCGCTATCC GCTATAAGTT TAGAGCCGGC
TAA
 
Protein sequence
MKINVSVFGE VNGNTVNAFT LNNANGMSVT LLNYGGIIKD ITVPNAEGKP IHCVQTFDTL 
QEYIDDPSYR SAIVGRYANR IGHGTFCLNG TQYTLDKNGG EHNLHGGFAG FHKKIWQAST
NELDNSASVT FKLHSPDGEG GFPGNVKVEA CYTLNNNNEL SLELSATTDK ETPLSFTQHA
YFTLSNDDKV GSTLLHIDAE QVTDADSSLL PTGKLVDIGG TPFDFLSLTP IEKRASQQAS
HALFDMVGGY DHNYVLRAAK GSEPQATVMA PDTGISMELF TTLPGLQFYT GSLDSDEQLG
ALCLEPQHFP DAPNKPAFPN CFVKPEETFK AAIRYKFRAG