Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00229 |
Symbol | |
ID | 6779210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 243556 |
End bp | 244611 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642753657 |
Product | putative GalR repressor of contiguous operon, likely to bind a galactoside |
Protein accession | YP_002124541 |
Protein GI | 196155052 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTATTA GGCCTAGTCG CCCCCATGCA ATAAAAACGA AGTTTGAAAA GAAAATGGCA ACAATAAAAG ATATAGCCCA AGCCGCTGGT GTCTCATTGG CTACCGTATC AAGGGTTATT AATAATGGCC CGAAAGTGGG CAATGACACA CGCAAGCGCG TTAAAAAAAT CATGGAAGAA ATGGGATATC GTCCCAACGC TAATGCGCGT GCGCTTGTAA CAAAACGCAG TGCGTCGCTA GGTGTGGTCA TCGCTGAACT TCACGATCCG TTTTTTGCCA TGCTCGCCCA CGGCGTCGAG TCGATAACGC GAAAGAACAA CGTTCAAATA TTGTTGAGCG CGGGCTCCAT AGAAAAAGAA ACCGAACTTC GCGCTATTGA AACCTTGTTA GAACACCGCG TAGAAGCCAT GGTTGTTCAC AGTAAAGCGC TAGATGATGA AACGCTTATC GGCTTTGCTA AACAAGTCCC TGGCTTTGTG CTGATAAATA GATACATTCC TGAAATTGCA AATAGGTGCG TGTGGCTAGA TAACGTGACA GGCGGCCGCC TTATGGCCGA ATATGCCATC AGTCAGGGTC ATAAGCATTT AGCAGTAATT AGTAGCCAAT ATCGTATCGA CGACCCTAAC CACCGTTTAG AAGGTATTAG AAACGCTGTC GACAACGCAA AGTTAAGTTT GACTGAGAGT ATGATTGAGT ATGCCACCCC CGATCAGGAG GGCGGTGAAT TAGCGATGCA GAATTTGCTT GCCACAGGCG CCCAATTTAC TGCCGTGTTA GCATACAACG ATGCAATGGC TTCAGGGGCG ATGACAATGC TGCAAGATCA TGGCATTTGT GTGCCCGACC AAGTGTCGGT AATGGGTTAC GATGACGTAT TGCTCGCTAA ATACTGCCGA CCTAAATTAA CCACGCTTCG ATACCCTGTG GAAATGATGG CAGCCAAAGC GGCTGAACTC GCATTGAAAT ATGCATCGGG CAGTAAGCCA GAAGACGGCC TAACATTTAA ATATACCCCA ACGGTAGTCA AACGCGACTC CATCATTCGA ATTTAA
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Protein sequence | MSIRPSRPHA IKTKFEKKMA TIKDIAQAAG VSLATVSRVI NNGPKVGNDT RKRVKKIMEE MGYRPNANAR ALVTKRSASL GVVIAELHDP FFAMLAHGVE SITRKNNVQI LLSAGSIEKE TELRAIETLL EHRVEAMVVH SKALDDETLI GFAKQVPGFV LINRYIPEIA NRCVWLDNVT GGRLMAEYAI SQGHKHLAVI SSQYRIDDPN HRLEGIRNAV DNAKLSLTES MIEYATPDQE GGELAMQNLL ATGAQFTAVL AYNDAMASGA MTMLQDHGIC VPDQVSVMGY DDVLLAKYCR PKLTTLRYPV EMMAAKAAEL ALKYASGSKP EDGLTFKYTP TVVKRDSIIR I
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