Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00223 |
Symbol | |
ID | 6776109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 235942 |
End bp | 238773 |
Gene Length | 2832 bp |
Protein Length | 943 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642753651 |
Product | excinuclease ABC subunit A |
Protein accession | YP_002124535 |
Protein GI | 196155046 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0178] Excinuclease ATPase subunit |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.44866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAA TCGAAATTCG CGGTGCTCGC ACCCACAACT TGAAAAACAT CGATTTAACA CTGCCACGAG ACAAACTGGT GGTGATAACC GGCCTTTCTG GCTCGGGTAA ATCGTCTCTA GCATTTGACA CGCTATACGC AGAAGGCCAA CGACGTTACG TTGAGTCTTT GTCTGCCTAT GCCCGTCAGT TCCTTTCCAT GATGGAAAAA CCCGATGTTG ATCATATTGA GGGTTTATCG CCTGCAATAT CCATTGAGCA AAAATCAACG TCACACAACC CTCGCTCTAC CGTAGGTACC ATCACCGAAG TTTACGATTA CTTGCGACTG ATGTTTGCCC GTGTAGGTAC GCCTCGCTGC CCTGATCACG ATGTACCGCT AGACGCCCAG ACCGTCAGTC AAATGGTGGA TAAAGTGTTG GCGATGCCAG AAGGCAGTAA GCTAATGCTA TTAGCGCCTA TCGTTAAAGA GCGTAAAGGT GAACACGTAA AAGCTTTGCA AAACCTCTCA GCACAGGGCT TTATTCGTGC GCGCATTGAT GGAGAGGTAT GTGACCTATC GGATCCGCCG CCGCTAGACC TGCACAAGAA GCACACCATC GAAGTGGTGG TAGATCGTTT CAAGGTGCGC GACGATATGG CACTGCGTTT GGCTGAATCA TTCGAGACGG CGCTTAGCCT TGCTGGCGGC AACGCGGTTG TGGCTGATAT GGACGATAAA GACGCAGAAG AAATTGTATT TTCTGCCAAC TTCGCCTGTC CACACTGCGG TTACAGCATT AGTGAACTTG AACCTCGTCT GTTTTCATTT AATAACCCAG CGGGTGCATG CCCAACTTGT GACGGGCTAG GTACAAGACA GTTTTTTGAC CCAGCACGCG TAGTCGGCAA TACCGAATTA AGTTTGTCTG GCGGCGCTAT TCGCGGATGG GACAAGCGCA GCTATTACTA TTTTCAAATG CTACAGGCAG TAGCAGACCA TTATAAATTT AGCCTTACCG CACCATTTGA AGAGCTCGAT AAAAAGCACC AAGACATTGT GCTTTATGGG TCTAAAGGCA AGTCGCTGTC GTTTAAGTAC ATAAACGAGC GTGGCGACGT GATGGAGCGT AAGCATCCAT TTGAGGGCAT TATCCCTAAT ATGGAACGTC GCTATCGAGA GACCGAGTCG AATTCGGTGC GTGAAGAGCT AGCAAAATAT TTAAGCCAGC AGCACTGCAG CAGCTGTAAC GGCACGCGTC TGCGTGTTGA AGCACGTCAT GTATTTATAC AAGACACCAA CCTGCCAGCC ATTGCTGACA TGTCGATTGC CGATGCATAC GGCTTCTTCG AGACACTGAA ACTTGAAGGT CAACGTGCTC AGATAGCCGA AAAGATTTTG AAAGAAATCA TGGACCGCTT GCGCTTCTTG GTAAACGTAG GTCTTAACTA TCTTTCTATG TCGCGCAGCG CCGATACTCT ATCGGGCGGT GAAGCTCAGC GCATTCGACT GGCAAGTCAA ATTGGCGCAG GCTTAGTGGG CGTTATGTAC GTGCTGGATG AGCCCTCTAT CGGTCTTCAT CAACGGGATA ACGAACGCCT ACTTGGCACG CTTACACACT TGCGCGATCT AGGTAACACC GTGTTAGTTG TAGAGCACGA CGAAGATGCC ATTCGCGAAG CCGATTACAT TGTAGATATC GGCCCGGGGG CGGGTGTGCA TGGTGGTGAG ATTATCGCCG AAGGTTCGCT TGAAGATATC AAAAACAGTG AACACTCACT TACTGGAAAA TACTTATCTG GTAGAGAGAA GATAGATATC CCTGCAACAC GCACACCGGT TAAAGACGAC AAGTGGCTAG AGCTTTTAGG CGCTACCGGT AACAACTTGA AGTCTGTTGA TTTACGTATA CCTACTGGTG TAATGACCTG TGTAACCGGT GTATCGGGCT CGGGCAAATC AACGCTGATT AATGACACTT TCTACAAAAT AGCGCAGCGC GAGCTGAACA AGGCGACTAC TTCTGAACCG GCACCGCATA AGTCGATGAC CGGATTAGAT CAGCTCGACA AAGTGGTCGA TATTGACCAA AGCCCTATCG GCAGAACACC GCGCTCTAAT CCGGCGACTT ACGCAGGCAT TTTCACTCCA ATTCGTGAAA TGTTCGCCGG TACACAAGAG TCGCGTTCAC GGGGTTACAA GCCTGGCCGC TTTAGCTTTA ACGTAAAAGG CGGTCGCTGT GAGGCGTGTC AGGGTGACGG TGTAATTAAA GTGGAAATGC ACTTTTTGCC AGACGTGTAT GTGCCTTGTG ACGTATGTCA GGGCAAACGC TATAACCGTG AAACCCTTGA GATAAAGTAC AAAGATAAGA ACATTCACGA AGTGTTGGAA ATGACGGTGG AAGATGCCCG TCAGTTCTTC GATGCTATTC CGGCTATTTC ACGTAAATTG CAGACCCTAA TGGACGTTGG CTTGTCATAT ATTCGTCTAG GCCAAGCAGC CACTACGTTA TCAGGTGGTG AAGCACAGCG CGTGAAATTA GCGAAAGAGT TGTCAAAAAG AGACACTGGG CAAACACTCT ATATCTTGGA CGAACCAACC ACCGGGTTGC ACTTCCACGA TATTAAACAG TTATTAGCCG TCCTTCACAG GCTGCGCGAT CACGGTAATA CCGTTGTGGT TATTGAGCAT AACCTAGATG TGATTAAAAC CGCAGACTGG ATTGTTGACC TTGGACCCGA AGGTGGATCC GGAGGTGGCC AGATTATTGC AGAGGGAACA CCTGAGCATG TGGCACAACA AGAAGTTTCA CATACAGGTC GATTCCTGAA ACCCATGCTC ACACAAGCTT GA
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Protein sequence | MDKIEIRGAR THNLKNIDLT LPRDKLVVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY ARQFLSMMEK PDVDHIEGLS PAISIEQKST SHNPRSTVGT ITEVYDYLRL MFARVGTPRC PDHDVPLDAQ TVSQMVDKVL AMPEGSKLML LAPIVKERKG EHVKALQNLS AQGFIRARID GEVCDLSDPP PLDLHKKHTI EVVVDRFKVR DDMALRLAES FETALSLAGG NAVVADMDDK DAEEIVFSAN FACPHCGYSI SELEPRLFSF NNPAGACPTC DGLGTRQFFD PARVVGNTEL SLSGGAIRGW DKRSYYYFQM LQAVADHYKF SLTAPFEELD KKHQDIVLYG SKGKSLSFKY INERGDVMER KHPFEGIIPN MERRYRETES NSVREELAKY LSQQHCSSCN GTRLRVEARH VFIQDTNLPA IADMSIADAY GFFETLKLEG QRAQIAEKIL KEIMDRLRFL VNVGLNYLSM SRSADTLSGG EAQRIRLASQ IGAGLVGVMY VLDEPSIGLH QRDNERLLGT LTHLRDLGNT VLVVEHDEDA IREADYIVDI GPGAGVHGGE IIAEGSLEDI KNSEHSLTGK YLSGREKIDI PATRTPVKDD KWLELLGATG NNLKSVDLRI PTGVMTCVTG VSGSGKSTLI NDTFYKIAQR ELNKATTSEP APHKSMTGLD QLDKVVDIDQ SPIGRTPRSN PATYAGIFTP IREMFAGTQE SRSRGYKPGR FSFNVKGGRC EACQGDGVIK VEMHFLPDVY VPCDVCQGKR YNRETLEIKY KDKNIHEVLE MTVEDARQFF DAIPAISRKL QTLMDVGLSY IRLGQAATTL SGGEAQRVKL AKELSKRDTG QTLYILDEPT TGLHFHDIKQ LLAVLHRLRD HGNTVVVIEH NLDVIKTADW IVDLGPEGGS GGGQIIAEGT PEHVAQQEVS HTGRFLKPML TQA
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