| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00198 |
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| Symbol | |
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| ID | 6775820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 214090 |
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| End bp | 215022 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642753626 |
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| Product | Conserved membrane protein RarD |
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| Protein accession | YP_002124510 |
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| Protein GI | 196155021 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.493256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTGG AGCCAGCCTT GTCAAAGCAA GCCAGTGCCG CTCAAGTCGG TGTTATTTGC
GCTATTGCCG CATACAGTAT GTGGGGCGTT GCGCCTGTTT ATTTCAAGCA ATTAATGGTG
TTGCCGGCAG CTGAAATCCT TATGCATAGA GTGATATGGT CGGTGGTGCT GCTTGTTGGT
TTTATCGCTG CGTTAAAGCA ATGGCCTAAG GTTGGTGCAG CCTTTCGCAA TAAACGGGTT
ATGCAAATCT TGTTCGTTGC CGGGCTGTTA CTCGGGGCTA ACTGGCTTTT ATTTATCTGG
GCGATTAATA ACGACCACAT CTTGGATGCC AGTTTAGGGT ATTACATTAA CCCGTTAATT
AACGTGTTTT TAGGGCGGCT TTTCTTAGGT GAGCGGTTAC GCAACTTACA GCGTGTTGCG
GTTGGGCTTG CTGTTGTTGG CGTTGCCATT CTTATCTTCT CTTACGGTCA TGTACCTTGG
ATTGCCTTGG TGCTTGCTGG CAGCTTCAGT GTATACGGCC TGCTCCGTAA GCAAGTGGCG
GTAGACTCAC TGCCTGGCCT TTTCATTGAA ACCTTGATGT TATCGCCGTT AGCGATTATC
TACTGGCTAT TCTTTGGTTC TGAATATAGC AACCTATTTA ATAATGACGC CACGCTAAAC
ACCCTTATCC TAGCAGCTGG TATTGTTACT ACAGCGCCAT TACTCTGTTT CACAGCGGCA
GCAAGGCGCA TTATGTATTC AACGCTAGGC TTTTTTCAGT ATATCGGGCC AACGCTTATG
TTTATTCTGG CGGTATATCT ATACGGCGAG CCGCTAGAAG AGTCTAGGCT GGTTACCTTT
GGTTTTGTAT GGATAGCGCT TATCTTATTT AGTGCCGACT CATTGGTGAA TTATCGCAGT
CAGCGCAAGG CGCAAAAGCG CTTTGCAGAA TAG
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| Protein sequence | MSLEPALSKQ ASAAQVGVIC AIAAYSMWGV APVYFKQLMV LPAAEILMHR VIWSVVLLVG
FIAALKQWPK VGAAFRNKRV MQILFVAGLL LGANWLLFIW AINNDHILDA SLGYYINPLI
NVFLGRLFLG ERLRNLQRVA VGLAVVGVAI LIFSYGHVPW IALVLAGSFS VYGLLRKQVA
VDSLPGLFIE TLMLSPLAII YWLFFGSEYS NLFNNDATLN TLILAAGIVT TAPLLCFTAA
ARRIMYSTLG FFQYIGPTLM FILAVYLYGE PLEESRLVTF GFVWIALILF SADSLVNYRS
QRKAQKRFAE
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