Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00172 |
Symbol | |
ID | 6777803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 182935 |
End bp | 183963 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 642753600 |
Product | Abi-like protein |
Protein accession | YP_002124484 |
Protein GI | 196154995 |
COG category | [V] Defense mechanisms |
COG ID | [COG4823] Abortive infection bacteriophage resistance protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCAAT TCAACAAACC CGCGGTTAGT GTTACAGAAC AAATCAGCAT TCTTAAAAAT CGCGGTCTAG CCATTCAATT TCCAGAGCGT GCGGAAAGAT ATTTAGAAGT AATAAGCTAT TTTCGCCTTA GCGCATATAT GCGCCCCTTC CAAAAGAATA TAAACAAACG AGGTGTAGAC CATCAATTCA AAGATGGAAC TGAATTTAAA CAAATAGTGA ACTTGTACTC TTTTGATAGA GAATTGCGAT TGCTCATTAT GGACGCTATT GAGAGAGTAG AAGTTGCAAT TCGAGCTACC TTGAACAACG TGATGGCTAA CAAGTATCAA ACTGATGATA TATGTAGTGG TTCTCACTGG TACTTGAATA AATCATTATT TAAATCATCA TATCAGCACA AACGACTGTT AAAAGAAATC GAAGACAAGC AATCAAAAGA ATTCAACGAT CTTCAGAGAG ACGTAAAAAA GATTGAACGA ACTTCAGCTG CCGCAGAAAT TAAAGTACGG CGGATTGAAA GAAGAGTTAG AGAGAATTAT GCCCGCTTTT ACCAACATAC ATATGATTCG CCTCAGCTTA TGCCTGGTTG GGCGATGGTA GAAGAACTAA CTCTCGGGAG TATATCTCAC CTATATCGGG GGCTAGCAAG AGATAGCGAC CGTAAAGACA TAGCTAGAAG ATTTGACTTA CCTCAAGAGG TTCTTGAAAG TTGGTTGCAT ACGCTAAACT TTGTGAGGAA TTGTTGCGCA CATCATAGTC GGCTTTGGAA TAGAGAGTTG TCTGTTCAGC CCAAAATTCC CAATGGTGAT AACTGGCAGA TGCCAGATAG ATTAGAGCCC AGCCAGGTTC AGCCTAAGCG TCGTATCTAT ATGGTGTTAC TTATGTTAGG TCACCTGATG AGACAGGTTA GTCCAGATAG TCAATGGCAT AAGAAAGTAA AAGCGCTGGT TACACTTCAT CCCGAAATCC CAATATTTCC TATGGGCCTT CCTGATGATT GGCTTACCCA CGAATTCTTC AGTAGTTAA
|
Protein sequence | MNQFNKPAVS VTEQISILKN RGLAIQFPER AERYLEVISY FRLSAYMRPF QKNINKRGVD HQFKDGTEFK QIVNLYSFDR ELRLLIMDAI ERVEVAIRAT LNNVMANKYQ TDDICSGSHW YLNKSLFKSS YQHKRLLKEI EDKQSKEFND LQRDVKKIER TSAAAEIKVR RIERRVRENY ARFYQHTYDS PQLMPGWAMV EELTLGSISH LYRGLARDSD RKDIARRFDL PQEVLESWLH TLNFVRNCCA HHSRLWNREL SVQPKIPNGD NWQMPDRLEP SQVQPKRRIY MVLLMLGHLM RQVSPDSQWH KKVKALVTLH PEIPIFPMGL PDDWLTHEFF SS
|
| |