Gene MADE_00172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00172 
Symbol 
ID6777803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp182935 
End bp183963 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content40% 
IMG OID642753600 
ProductAbi-like protein 
Protein accessionYP_002124484 
Protein GI196154995 
COG category[V] Defense mechanisms 
COG ID[COG4823] Abortive infection bacteriophage resistance protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAT TCAACAAACC CGCGGTTAGT GTTACAGAAC AAATCAGCAT TCTTAAAAAT 
CGCGGTCTAG CCATTCAATT TCCAGAGCGT GCGGAAAGAT ATTTAGAAGT AATAAGCTAT
TTTCGCCTTA GCGCATATAT GCGCCCCTTC CAAAAGAATA TAAACAAACG AGGTGTAGAC
CATCAATTCA AAGATGGAAC TGAATTTAAA CAAATAGTGA ACTTGTACTC TTTTGATAGA
GAATTGCGAT TGCTCATTAT GGACGCTATT GAGAGAGTAG AAGTTGCAAT TCGAGCTACC
TTGAACAACG TGATGGCTAA CAAGTATCAA ACTGATGATA TATGTAGTGG TTCTCACTGG
TACTTGAATA AATCATTATT TAAATCATCA TATCAGCACA AACGACTGTT AAAAGAAATC
GAAGACAAGC AATCAAAAGA ATTCAACGAT CTTCAGAGAG ACGTAAAAAA GATTGAACGA
ACTTCAGCTG CCGCAGAAAT TAAAGTACGG CGGATTGAAA GAAGAGTTAG AGAGAATTAT
GCCCGCTTTT ACCAACATAC ATATGATTCG CCTCAGCTTA TGCCTGGTTG GGCGATGGTA
GAAGAACTAA CTCTCGGGAG TATATCTCAC CTATATCGGG GGCTAGCAAG AGATAGCGAC
CGTAAAGACA TAGCTAGAAG ATTTGACTTA CCTCAAGAGG TTCTTGAAAG TTGGTTGCAT
ACGCTAAACT TTGTGAGGAA TTGTTGCGCA CATCATAGTC GGCTTTGGAA TAGAGAGTTG
TCTGTTCAGC CCAAAATTCC CAATGGTGAT AACTGGCAGA TGCCAGATAG ATTAGAGCCC
AGCCAGGTTC AGCCTAAGCG TCGTATCTAT ATGGTGTTAC TTATGTTAGG TCACCTGATG
AGACAGGTTA GTCCAGATAG TCAATGGCAT AAGAAAGTAA AAGCGCTGGT TACACTTCAT
CCCGAAATCC CAATATTTCC TATGGGCCTT CCTGATGATT GGCTTACCCA CGAATTCTTC
AGTAGTTAA
 
Protein sequence
MNQFNKPAVS VTEQISILKN RGLAIQFPER AERYLEVISY FRLSAYMRPF QKNINKRGVD 
HQFKDGTEFK QIVNLYSFDR ELRLLIMDAI ERVEVAIRAT LNNVMANKYQ TDDICSGSHW
YLNKSLFKSS YQHKRLLKEI EDKQSKEFND LQRDVKKIER TSAAAEIKVR RIERRVRENY
ARFYQHTYDS PQLMPGWAMV EELTLGSISH LYRGLARDSD RKDIARRFDL PQEVLESWLH
TLNFVRNCCA HHSRLWNREL SVQPKIPNGD NWQMPDRLEP SQVQPKRRIY MVLLMLGHLM
RQVSPDSQWH KKVKALVTLH PEIPIFPMGL PDDWLTHEFF SS