| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00160 |
|---|
| Symbol | |
|---|
| ID | 6776002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 171620 |
|---|
| End bp | 172093 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642753588 |
|---|
| Product | antioxidant, AhpC/Tsa family protein |
|---|
| Protein accession | YP_002124472 |
|---|
| Protein GI | 196154983 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0678] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACAAG TTGGTAGCAC CTTGCCCGAG GTGGATTTCG GTCTTTTAGT CGATGGAGAA
ATGACAAACC CAGGCACTAA TGAACTTTTC TCGGACAAGC GCGTTGTGTT GTTTGCAGTA
CCAGGGGCGT TCACGCCAAC CTGTTCACAG GCTCATTTGC CGGGCTATGT GGCACTAGCA
GACAAAATTA AAGCGAAAGG TATTGATAGC ATTATCTGTC TTTCTGTAAA CGATGCGTTT
GTTATGGATG CATGGGGTAA GGCTAATAAT GCAGAAGAAA TTATTATGCT AGCCGATGGG
AATGGTCATT TCACAAAGCA AATTGGCTTG GATATGAATA CCAGTAACTT CGGTGGCTTG
CGTTCATTGC GTTATTCAAT GTTAATTGAA GACGGTGAAG TGAAGAAAAT AAACGTAGAA
GACCCGGGTC GCTTTGATGT GAGCGATGCG CAAAGCATGC TAGATAGCTT GTAA
|
|---|
| Protein sequence | MIQVGSTLPE VDFGLLVDGE MTNPGTNELF SDKRVVLFAV PGAFTPTCSQ AHLPGYVALA
DKIKAKGIDS IICLSVNDAF VMDAWGKANN AEEIIMLADG NGHFTKQIGL DMNTSNFGGL
RSLRYSMLIE DGEVKKINVE DPGRFDVSDA QSMLDSL
|
|---|
| |