Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00138 |
Symbol | |
ID | 6778980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 146410 |
End bp | 147849 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642753566 |
Product | hypothetical protein |
Protein accession | YP_002124450 |
Protein GI | 196154961 |
COG category | [R] General function prediction only |
COG ID | [COG3106] Predicted ATPase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATGGCA AAGGAACTAA AGCTGCAAAG GCAGAATACA AACAAATAAT GCAGAAAAAT ATCGCTACGT TTTTTGACAA GACTCGGGAA ATAGCGTCGC TAACTGGCGA CAAACTAAGT AGTGCGTTTA ACAAAGAGAC GCACCGTTTC ACCATAACGG GGCTTAGTCG AAGCGGTAAA TCTATGCTGT TTACCAGCCT TATTACCATG CTTAAAAGCC GTAGTGAAGA GGGCTATGCG TGTTTGCCCT TGTTGCGTTA TTTACCGCCC TCCCAAGTGC TTGATATGCA TATAGAGCCT ATTGATGGCT ATAAACCTTT TCCTCATATA CAGAATATTG AAGACCTGGA GAACGGGCAG TGGCCGAAGG CTACTGAAGA AGCATTTGGC TTTAAACTAG TGGTGCGCTT AAAAGAAACA GCCTCACTAA AGCGCCATGT ATTGCCGCAC AGCGACGTAG TATTTGAATT TATCGATTAC CCCGGCGAGT GGGTAACCGA CATTCCTATG TTAAGTAAAA CCTATGCGCA CTGGTCAGAT TCTGCATGGG CACAGCTTAG TAGCGGGCCG CAGCAGTATT TTGCTAATCA ATGGAAAGCG TTCGTTAATC AATTCGATTT CGAGCAGGAG CCAACGGAGC AGCGCATACA GCTACTGGTT AACGCTTACC GCGATTATTT AGTAGACGCC AAAGCGAACG GCATATCTTT ACTTCAGCCG GGCAGTTTTT TGTTGGAATC TAGCGACTTT GATTGGCAGG CATTTGGGTT TACACCACTG CCGTCCAGCA TTACCAGCGA CGTGTCGCAC CCGTGGTTCA ACATATTCGA TAAGCACTTT GCTAAGTTTC AAAATGGATG GTTAACGCCG TTAAAACAGT CCATTTTTAA AGAAACGGAT AAACAAATTA TTCTGGTAGA TTTGTTTGAA GGGCTTAACC ACAGCAGGCA GCATTTGTAT CAGTTAAAGG AAACCCTAAG CCATTTGGCC GATACGTTCG TGTACGGGCA AAGCACGTGG TTTTCACGTA ATGTGTTAAA GAAAGAGCAA ATAGGTAAAG TGGCGTTTGT GGCCACCAAA TCCGATCTTA TCCCGGTTAG CCAGCGGGGC AATTTACTGA GTTTGTTAAT GCAAATTACC GAAGGGGCCA GAGCACGGTT CGATGGTAAA CCTATCCAGT TTGAACATTT TTTAGTGTCG AGCATGCAAG TGACCGACGA TGGCAGTAAT GAAGATGCTA TTCGCTATAA AGACACCGAT GGTCGCTATG TTGAATCTAC GTTCGAGCCC ATTCCTAGCA CATTGAAAGA GATGGAAGAG GGCAGCCATT TCCCTGTACC AGATGTAAGT GTGCCAAGCG ATTACAAAGC ACGTATTTTG GCCGGCAAAG GCGTAGACAG ATTGCTTCAG TTTTTACTGG GCAAAGGAGA GCAAGAATGA
|
Protein sequence | MNGKGTKAAK AEYKQIMQKN IATFFDKTRE IASLTGDKLS SAFNKETHRF TITGLSRSGK SMLFTSLITM LKSRSEEGYA CLPLLRYLPP SQVLDMHIEP IDGYKPFPHI QNIEDLENGQ WPKATEEAFG FKLVVRLKET ASLKRHVLPH SDVVFEFIDY PGEWVTDIPM LSKTYAHWSD SAWAQLSSGP QQYFANQWKA FVNQFDFEQE PTEQRIQLLV NAYRDYLVDA KANGISLLQP GSFLLESSDF DWQAFGFTPL PSSITSDVSH PWFNIFDKHF AKFQNGWLTP LKQSIFKETD KQIILVDLFE GLNHSRQHLY QLKETLSHLA DTFVYGQSTW FSRNVLKKEQ IGKVAFVATK SDLIPVSQRG NLLSLLMQIT EGARARFDGK PIQFEHFLVS SMQVTDDGSN EDAIRYKDTD GRYVESTFEP IPSTLKEMEE GSHFPVPDVS VPSDYKARIL AGKGVDRLLQ FLLGKGEQE
|
| |