Gene MADE_00133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00133 
Symbol 
ID6776680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp140061 
End bp142154 
Gene Length2094 bp 
Protein Length697 aa 
Translation table11 
GC content49% 
IMG OID642753561 
ProductFhuE receptor 
Protein accessionYP_002124445 
Protein GI196154956 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.174299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAT CTAGCCTATT TGCACTAACG CCACTTGCCC TTGCGCTGTC AGTACAAGCG 
CAAACACCCC AAACAAATAC TGACGACGTT AAAGAAGCCG ACGTAGAAAA AATTCGTATT
GTTGGCGTTC GTCAAAACCG CGTAAGCCGC GGTGCTACGG GCTTAACCAT GGAAGTCAGC
GAAACGCCGC AGTCTATAAG TATTCTTTCT GAAGACTTAA TGCAGTCGTT TGGTGCGTTT
AATATTAACG ATGCGCTAAA GCTAGCGCCG GGTATTAACG TAGAAGAGTG GGAAACCAAC
CGTACCAACT ACACGGCCCG TGGTTTTGAA ATTAAGAATA CCCAGATAGA CGGTGTGGGC
CTGCCGAACG ACTGGGGTAT TGTTACCGGT TCGGTAGAAG CGTATGGCTA CGAAGAAATT
GAAGTGATTC GTGGTGCCAA CGGCCTGCTA ACCGGGGTAG GTAATGCGTC GGGTACCATT
AACTATGTGC GCAAGCGCCC CACCAATGAA GAAGGCGGTG AAATTGGTGC AAGTATTGGC
TCTTATAACT TTAAGCGCGT GCAGGGCGAC TATTCTATGC TGCTTACCGA AGACGGCAGC
TGGGCAGCTC GCGTAGTAGG TAGTGTTGAA GATAAAGAGT CGCACCTTGA TGGCCTAGAG
AACGACCGCA GCTTTGTTTA TGGTGTTATT GACGGCCAGC TAACCGATAA CGCCACGGTA
ACGTTTGGGC TGTCGTATCA AGATGCCAAT ACCGACGGCA ACACCTGGGG CGGGCTAGTG
TTTAACTACA CCGACGGCAC GCAAGCCGAG TGGGACATTA ACGACACTAC CACACAAGAG
TGGACAAAGT GGGATACCGA AACGACTAAT GCGTTTGTTG AACTAGACTA TGTGTTCGAC
AACGACTGGC AGCTACTGCT TAGCTATAAC TACCGCGATT TTGAAGATCA GAGCAAGCTG
TTTTACGCCT ATGGCGCTAT TGATAAAGAC ACCGGCCTAG GCCTTGTTGG CTGGCCAGGT
CGCTACGATT CAGAGCGCGA TTCTCACCTA GTAGAAGGCC GTGTATTTGG CGATTTTGAA
CTATTTGGTC GCAACCACGA AGTGAACTTT GGTGTAAGCC ACGCCACCAG CGATGATGTG
TCTTTTGTTC ACGCGTTTGA TTATGCAACC ACACCTGCAT ATGGCCCCAC GCCAGCGTTC
CCTTATGCGT TAGATGCCAT AGCCGAACCT GACTGGTTAG ACGTTTCCGA GTATTCAAAC
ATTGAACAAA CCCTAACCCG TTACTTTGGT TCTGCCCGTT TTAGCGTTAC CGATGACATG
CACGTTATTG CCGGTTTTAA TGCCATCGAC TTTGAGCGTA AGGGGCAAAA CGCCGGAGCT
GTTATCGATA ACTCAGAAAG CGAAGCCAGC CCTTATGTGG GCGCGACTTA TGCGGTAACT
GAAGATGTTA ACGCGTACGT AAGCTATTCA GACGTGTACC AGCCGCAAGA ACAGTATGAT
ATTAACGGTC AGTACCTAGA CCCAACTAAA GGTCAAAACT TTGAGGCGGG CGTGAAAGCC
CAGTGGTTCG ACAATAGGTT ACTCACCACG TTTGCTTACT TCACGGCAGA GCAAGACAAC
CTAGCCGCTT ACGCAGGCAC CAACCCAGAT ACGCTGCAGT ATTACTATGA AGGTGTGTCG
GTAGAGTCTG ATGGTTTTGA AATTGAAGTG GCGGGGCAGG TAACTGACGC GCTGCGTGTT
AATGCGTCTT ACACCAATAT TGATGTAGAA GACGAGCAAG GCAATGATGC TAACCTGTGG
GCGCCACGCG ATGTGGTTAC CTTTCAGCTA GGGTACACAA TACCGCAAGC GCCAGAGGTG
GAAGTGGGCT TTGGCGGCCG CTGGCAGTCT GAGATAAGCA ATGTGGATTA TAACGTTAAA
CAAGGGGCGT ATTTCTTGGG TAACGTGTAT GCGTCTCGCG CGTTTACCGA CGACCTTACG
GTTCGCATGA ACATCAATAA TATTTTCGAT AAGAAGTATA TTAACAGCCT ACATACCGTG
GGTTACTACG GCGCTGGCAT TAATGCACAG TTAAGTGCCT CTTATACCTT TTAA
 
Protein sequence
MKLSSLFALT PLALALSVQA QTPQTNTDDV KEADVEKIRI VGVRQNRVSR GATGLTMEVS 
ETPQSISILS EDLMQSFGAF NINDALKLAP GINVEEWETN RTNYTARGFE IKNTQIDGVG
LPNDWGIVTG SVEAYGYEEI EVIRGANGLL TGVGNASGTI NYVRKRPTNE EGGEIGASIG
SYNFKRVQGD YSMLLTEDGS WAARVVGSVE DKESHLDGLE NDRSFVYGVI DGQLTDNATV
TFGLSYQDAN TDGNTWGGLV FNYTDGTQAE WDINDTTTQE WTKWDTETTN AFVELDYVFD
NDWQLLLSYN YRDFEDQSKL FYAYGAIDKD TGLGLVGWPG RYDSERDSHL VEGRVFGDFE
LFGRNHEVNF GVSHATSDDV SFVHAFDYAT TPAYGPTPAF PYALDAIAEP DWLDVSEYSN
IEQTLTRYFG SARFSVTDDM HVIAGFNAID FERKGQNAGA VIDNSESEAS PYVGATYAVT
EDVNAYVSYS DVYQPQEQYD INGQYLDPTK GQNFEAGVKA QWFDNRLLTT FAYFTAEQDN
LAAYAGTNPD TLQYYYEGVS VESDGFEIEV AGQVTDALRV NASYTNIDVE DEQGNDANLW
APRDVVTFQL GYTIPQAPEV EVGFGGRWQS EISNVDYNVK QGAYFLGNVY ASRAFTDDLT
VRMNINNIFD KKYINSLHTV GYYGAGINAQ LSASYTF