| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00106 |
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| Symbol | |
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| ID | 6775128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 108738 |
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| End bp | 110498 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642753536 |
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| Product | putative choline-glycine betaine transporter |
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| Protein accession | YP_002124420 |
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| Protein GI | 196154931 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGTA ATACCCGAGA TGAAGTCTCA TCAAAGGCTA GCACTGAACA GGAAAGCGCA
TTTAGCGTAA TCGACAAGCC TACCTTTTTT GGCTCTCTTA TTCTTCTTCT GTCTGTCACT
CTTCCCCTTA TCATTTGGCC CGACCAAGGC GCCCAGTGGG TAGCCACGGC CAAAGACTTT
GTTACCAGTA AGCTCGGCGT TTTATACCTA TTGCTTGGTG TGGGCGCAGG TGGCTTCATG
GTTTACATCA TGTTCAGTGA TATTGGGCAA ATTAAACTGG GCGAGCCAGA AGAAAAGCCC
GAGTTCTCGC CTGTATCCTG GGCTGCCATG CTGTTTTGTG CCGGCATTGG GGCGTCTATC
TTGTACTGGT CGATGATTGA GTGGGTGTAC TACTACCAAG CGCCACCGTT TCACATAGAA
GGCGAAACCC CCGAGGCCGC TAAATGGGCC GCGGCCTACG GTATATTCCA CTGGGGGCCG
TTAGCGTGGG CGATTTATCT TATTCCCGCC GTGCCTATTG CCTACTTCTA CTACGTGCGC
AATCACAGCG TGTTAAAAAT ATCCGAAGCG CTTATGCCGG TCATCGGCGA GAAAATGGCC
CACGGCTGGT TGGGTAAAAT TATCGATATC AGCTTTATCT TCGGCATGCT AGGCGGCGGG
GCAACTACCC TTGGCTTGGC TGCACCTATG ATAAACGAAG GGGTACACGA ACTCTTCGGG
GTACCTAAAT CGCTGACTAC CCAAGTAATT GTGCTTGTAA CCTGTACCGC CATATTTGGC
TATAGCGCGT ATGTTGGCCT TAAAAAAGGC ATTAAGCTGC TGTCAGACAT TAACTTTTGG
CTGGCAGTTG GCTTACTGCT ATTTATCTTC ATTGTTGGGC CAACCTTATT TATGGCCAAT
ACCGGCCTAG ACGCCCTAGG CCGAGTAATG AGTAACATCA TAAAAATGGC CACATGGCTA
GAACCCTTCG CCGAATTCAA CGGCTTTGAA GACACCCACT TCCCACAAGA CTGGACCATT
TTCTACTGGG CTTGGTGGCT AGTGTTCGCG CCAAGCGTAG GTTTATTTAT TGCCCGTATT
TCACGTGGGC GTACCATTCG CACTATGGTG GCGGGCTCTA TGTTCTTCGG TACTATGGGA
TGCTTCTTAT TCTTCATGGT AATGGGCAAT TACGGCCTGT ATTTACAGCT ATCGGGCGAG
CTTGACGTAG TAAGCATACT TAACCAGCAA AGCCCAACAG CGGCTATTTT TGCCATGCTG
CATACGCTGC CGCTAGACTA CTTAGTTATT GCTGTGTTTA CACTGTTGGC ACTTATATTC
ACCGCTACGA CGTTCGATTC TATTTCTTAC ATTCTGGCAG CCGTAGTGCA AAAAGAAGTG
GATGAAGAGC CACTGCGCTG GAACCGTTTA TTCTGGGCCT TTGCGCTATC CTTCATGCCC
ATAGTACTTA TGTTTGTAGG CGGGTTAGAA ACGCTACAAA CCGCATCGAT AATAGGGGGC
GTACCGCTAC TCGCCGTTGC TTTAATGCTG TGTATTGCCA TAGTACGGGC GGCCAACTAC
GACATGCGTT ATCAGCCCGA TTATTCAATA AAAGAAATCA ACATAGGCGA ATTCCCCGAC
GACGACCCAT GGAGCGAAGA GGGCAGTTGG GAAATTGAAG AGGAAACCGA AGAAGACGTG
CCTATTGCGG CAAAACCTAA ACCTCGGGAA CCGAAAGACC ACATTGAAGG CGACCCGCAC
AGCAGGCCTT CTAGGCTGTA G
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| Protein sequence | MSSNTRDEVS SKASTEQESA FSVIDKPTFF GSLILLLSVT LPLIIWPDQG AQWVATAKDF
VTSKLGVLYL LLGVGAGGFM VYIMFSDIGQ IKLGEPEEKP EFSPVSWAAM LFCAGIGASI
LYWSMIEWVY YYQAPPFHIE GETPEAAKWA AAYGIFHWGP LAWAIYLIPA VPIAYFYYVR
NHSVLKISEA LMPVIGEKMA HGWLGKIIDI SFIFGMLGGG ATTLGLAAPM INEGVHELFG
VPKSLTTQVI VLVTCTAIFG YSAYVGLKKG IKLLSDINFW LAVGLLLFIF IVGPTLFMAN
TGLDALGRVM SNIIKMATWL EPFAEFNGFE DTHFPQDWTI FYWAWWLVFA PSVGLFIARI
SRGRTIRTMV AGSMFFGTMG CFLFFMVMGN YGLYLQLSGE LDVVSILNQQ SPTAAIFAML
HTLPLDYLVI AVFTLLALIF TATTFDSISY ILAAVVQKEV DEEPLRWNRL FWAFALSFMP
IVLMFVGGLE TLQTASIIGG VPLLAVALML CIAIVRAANY DMRYQPDYSI KEINIGEFPD
DDPWSEEGSW EIEEETEEDV PIAAKPKPRE PKDHIEGDPH SRPSRL
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