Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00102 |
Symbol | |
ID | 6776477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 103020 |
End bp | 104144 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642753532 |
Product | Outer membrane protein |
Protein accession | YP_002124416 |
Protein GI | 196154927 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGCTG AAACGTTAAG TGCTATCACC AACAATACTA CACAGCGCTT AAAGCAAATC TATAACGTTA ACCCCGAAAA ATTGCAGGAT AACGTTAAAA GTATCAATCG TTGGTTACAA GGGCCAGCCT CTTTGCAGCT TATTGCACTG CCAAGCAATA CACAAGGCGG TACAGATGAA TATGAGGTAG GGGTGTTTTT TCCCTTTCGG TCACCTGCGG GCAGAGAGCT AGACGCTCAG CAGTTGTCTA TTACCAACGC GCTGGATAAC CTTCAGGAAA CGCGGTTCAG GCTAATGACA AGCGGTTTAA TAAGAGAGGC ACTGTGGCAG CGTCTCTTTG CAAAAGCCGA AGTAGATGGG CTTTTAAGCA AGCAAGAGTG GATTGCGTCG TTAGACGGTG TAATAGCAAG CTTAGCAAAA ACTGGCGAGC TCGACCGTAT CGCCTCATTG AGGTGGCAGC AGGAAAAACT TTCACAGCAA TTGGCGTTGA AAAAAGCGCA AATGGCGTTA GATAAGGCGC AGAAACAATA CAGACAAGTC ACGGGTACTG ATGTATTACC AGAGCAAGTG ACCGAAGCCC TAGCTGGTGA TCTTGAGAAC AAACTGCAAA CACACCCTGA ATTAAGGCTA CTTACCCTGA GTCAATCTCA GATTGATATG AACTTGGCGC AGTCTGATCA ATCACTTTCT CCTTGGGTGC TAGGCGTTAT AGCAAGGCAG CTTAGGGGAC CAGCGGGCAA TGAGAATCTG CTTGGTGTCA GTATTAATAT TCCGCTGCCA ATGGGCGAGG GCAACTCTGC AAACAATTAT GCCTCATGGA AAGCAACACG CGACGAACTT ACCGAAGCAT TGGCAGAAAC GTACACACGC CTACAAACGC AGCTCAACGA CGCATTGCAA CAGGTTAACT ATCTTACTGA AGCTACAAAC AATTTAGAGG AGCAGGTTGA ATTGGGTGTA GAGATCGCCG ACCTGTACCA ACAGCAGGGT AGCGTGTTGC CCAAAACATT TTGGCTAGAG CAACTTATCG CCCAGCAGGA GCTTAAGCTA ACGCTGTCTC TCAATCGTCT ACGTCGCGCT GAAGCAATAT CAAAAGTTAA TCAAATCGCA GGAGTTACGC TTTGA
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Protein sequence | MAAETLSAIT NNTTQRLKQI YNVNPEKLQD NVKSINRWLQ GPASLQLIAL PSNTQGGTDE YEVGVFFPFR SPAGRELDAQ QLSITNALDN LQETRFRLMT SGLIREALWQ RLFAKAEVDG LLSKQEWIAS LDGVIASLAK TGELDRIASL RWQQEKLSQQ LALKKAQMAL DKAQKQYRQV TGTDVLPEQV TEALAGDLEN KLQTHPELRL LTLSQSQIDM NLAQSDQSLS PWVLGVIARQ LRGPAGNENL LGVSINIPLP MGEGNSANNY ASWKATRDEL TEALAETYTR LQTQLNDALQ QVNYLTEATN NLEEQVELGV EIADLYQQQG SVLPKTFWLE QLIAQQELKL TLSLNRLRRA EAISKVNQIA GVTL
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