Gene MADE_00102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00102 
Symbol 
ID6776477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp103020 
End bp104144 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content47% 
IMG OID642753532 
ProductOuter membrane protein 
Protein accessionYP_002124416 
Protein GI196154927 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCTG AAACGTTAAG TGCTATCACC AACAATACTA CACAGCGCTT AAAGCAAATC 
TATAACGTTA ACCCCGAAAA ATTGCAGGAT AACGTTAAAA GTATCAATCG TTGGTTACAA
GGGCCAGCCT CTTTGCAGCT TATTGCACTG CCAAGCAATA CACAAGGCGG TACAGATGAA
TATGAGGTAG GGGTGTTTTT TCCCTTTCGG TCACCTGCGG GCAGAGAGCT AGACGCTCAG
CAGTTGTCTA TTACCAACGC GCTGGATAAC CTTCAGGAAA CGCGGTTCAG GCTAATGACA
AGCGGTTTAA TAAGAGAGGC ACTGTGGCAG CGTCTCTTTG CAAAAGCCGA AGTAGATGGG
CTTTTAAGCA AGCAAGAGTG GATTGCGTCG TTAGACGGTG TAATAGCAAG CTTAGCAAAA
ACTGGCGAGC TCGACCGTAT CGCCTCATTG AGGTGGCAGC AGGAAAAACT TTCACAGCAA
TTGGCGTTGA AAAAAGCGCA AATGGCGTTA GATAAGGCGC AGAAACAATA CAGACAAGTC
ACGGGTACTG ATGTATTACC AGAGCAAGTG ACCGAAGCCC TAGCTGGTGA TCTTGAGAAC
AAACTGCAAA CACACCCTGA ATTAAGGCTA CTTACCCTGA GTCAATCTCA GATTGATATG
AACTTGGCGC AGTCTGATCA ATCACTTTCT CCTTGGGTGC TAGGCGTTAT AGCAAGGCAG
CTTAGGGGAC CAGCGGGCAA TGAGAATCTG CTTGGTGTCA GTATTAATAT TCCGCTGCCA
ATGGGCGAGG GCAACTCTGC AAACAATTAT GCCTCATGGA AAGCAACACG CGACGAACTT
ACCGAAGCAT TGGCAGAAAC GTACACACGC CTACAAACGC AGCTCAACGA CGCATTGCAA
CAGGTTAACT ATCTTACTGA AGCTACAAAC AATTTAGAGG AGCAGGTTGA ATTGGGTGTA
GAGATCGCCG ACCTGTACCA ACAGCAGGGT AGCGTGTTGC CCAAAACATT TTGGCTAGAG
CAACTTATCG CCCAGCAGGA GCTTAAGCTA ACGCTGTCTC TCAATCGTCT ACGTCGCGCT
GAAGCAATAT CAAAAGTTAA TCAAATCGCA GGAGTTACGC TTTGA
 
Protein sequence
MAAETLSAIT NNTTQRLKQI YNVNPEKLQD NVKSINRWLQ GPASLQLIAL PSNTQGGTDE 
YEVGVFFPFR SPAGRELDAQ QLSITNALDN LQETRFRLMT SGLIREALWQ RLFAKAEVDG
LLSKQEWIAS LDGVIASLAK TGELDRIASL RWQQEKLSQQ LALKKAQMAL DKAQKQYRQV
TGTDVLPEQV TEALAGDLEN KLQTHPELRL LTLSQSQIDM NLAQSDQSLS PWVLGVIARQ
LRGPAGNENL LGVSINIPLP MGEGNSANNY ASWKATRDEL TEALAETYTR LQTQLNDALQ
QVNYLTEATN NLEEQVELGV EIADLYQQQG SVLPKTFWLE QLIAQQELKL TLSLNRLRRA
EAISKVNQIA GVTL