Gene MADE_00087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00087 
Symbol 
ID6776390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp88331 
End bp89185 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content48% 
IMG OID642753517 
Productmetallo-beta-lactamase family protein 
Protein accessionYP_002124401 
Protein GI196154912 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTTG AAACATTTTA CGATAACAAA ACGGCCACGT TTACCTACGT GCTATTCGAC 
CCCGCTTCCA AAGAGTGTGG CGTGATAGAC TCGGTTGCTG ACTACGATAT CTTTTCGGGT
CGCGCGTCAA TGGAAAGCGC CGACAAGGTT ATCGACTTCA TCAACCAAAA ACAGCTTACT
AATAAGTGGA TTCTAGAAAC CCACGTACAC GCCGACCACA TTACGGCTGC GCACTACTTA
AAGTCTAAAA TTGGCGGCAA AATTGGTATT GGCTCAGGTA TTAAAACGGT GCTAAATACC
TGGCTAGATG TATTTGAAAC GGCCAACGAC ACGCCAAGCG ATGGCAGTCA GTTTGATGTG
CTGTTCGAAG AAGGCGACAC GTTCAATATC GGCGAATATG AAGTGACAGT ATGGCATACG
CCGGGGCATA CCCCAGCCTG TGCAAGCTTC TTAGTAGACG GCAAAATATT TGTGGGCGAC
ACCATGTTTG CCCCCAACTT AGGTACAGCA CGATGCGACT TCCCGGGTGG CAGTGCAGAG
CAACTTTACA ACACCATTCA GCGCTTCTTC ACCCTGCCTG ACGACACCAC TGTTTATCTT
GGTCACGACT ATCCCAAAGA AGGTACAGCG CCGCTATCAA CAGTATCTAT CAAAGAAGCC
AAGGAAACGA ACAAGCAAAT TCGCCCAGAA GTTACGCTTC AGGAATATGT GGAAAAACGC
GAGGCAAGAG ATGCAACCCT TGCGGTACCC AAACTACTGT TACCCGCTAT TCAAGCAAAC
CTTCGAAACG GCCAGTTTGG CGAGAAATCT GAAGGCGGTA AGCAGTTCAT TAAAATTCCT
GTAAATGCCA TTTGA
 
Protein sequence
MNVETFYDNK TATFTYVLFD PASKECGVID SVADYDIFSG RASMESADKV IDFINQKQLT 
NKWILETHVH ADHITAAHYL KSKIGGKIGI GSGIKTVLNT WLDVFETAND TPSDGSQFDV
LFEEGDTFNI GEYEVTVWHT PGHTPACASF LVDGKIFVGD TMFAPNLGTA RCDFPGGSAE
QLYNTIQRFF TLPDDTTVYL GHDYPKEGTA PLSTVSIKEA KETNKQIRPE VTLQEYVEKR
EARDATLAVP KLLLPAIQAN LRNGQFGEKS EGGKQFIKIP VNAI